Ligilactobacillus salivarius JCM1046: LSJ_1145c
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Entry
LSJ_1145c CDS
T03340
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSJ_1145c (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_1145c (ung)
Enzymes [BR:
lsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LSJ_1145c (ung)
DNA repair and recombination proteins [BR:
lsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSJ_1145c (ung)
Prokaryotic type
LSJ_1145c (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIR10818
UniProt:
A0A089QG76
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All DBs
Position
complement(1152303..1153001)
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AA seq
232 aa
AA seq
DB search
MLKTFIHNDWQEVLGPEFEKPYYTELHNFLKNEYKTQYIHPDMYHIYEAFEWTPFSKVKV
VILGQDPYHGPNQAHGLSFSVLPGVAIPPSLRNIYKELYSDLGIKPVNHGYLEKWAKQGV
LMLNSVLTVRNGQAFSHQGKGWEKLTDEAIKKLSERPMPVVFILWGAAARKKSALIDRKK
NIIIESPHPSPLSANRGFFGSRPFSKTNAALEALGETPIDWQLPEKVELTEK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaacgtttatacacaatgattggcaagaagtattaggtccagaatttgagaaa
ccttattatacagaattgcataattttttaaaaaatgaatataaaacgcagtatattcac
ccagatatgtaccatatatacgaagcctttgaatggacgccattttcaaaggtaaaagtt
gtcattttaggacaagatccttatcatggccctaatcaagctcatgggttaagtttttct
gtgttaccaggtgtggctattccaccttcattacggaatatctacaaggagttatactcc
gatttaggaataaaacctgttaatcatggttatcttgaaaaatgggctaagcagggtgtt
ttaatgttaaattcagttttaacagttagaaatggacaggcattttctcatcaaggaaaa
ggttgggaaaaattgacggatgaagcgattaaaaagctctcagaaagaccaatgccagtt
gtttttatattgtggggagctgctgctagaaaaaagtcagctttgattgatagaaagaag
aatatcattattgaatctccacatcctagtcctctttctgctaacaggggattttttgga
tctcgtccgttttcaaaaactaacgctgctctagaagcattaggtgaaacgccgatagat
tggcaattaccagagaaagtagaattgacagaaaagtaa
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