Ligilactobacillus salivarius JCM1046: LSJ_1240c
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Entry
LSJ_1240c CDS
T03340
Name
(GenBank) Transcription accessory protein
KO
K06959
protein Tex
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LSJ_1240c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
Vip3A_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AIR10910
UniProt:
A0A089QDW8
LinkDB
All DBs
Position
complement(1246879..1249050)
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AA seq
723 aa
AA seq
DB search
MDKKVLKLTNAELKYNPKKIEKVIELLEEGNTIPFIARYRKELTGSLDEVQLREIQVTYQ
RNEKIEIRKSEVLKKISEQNKLTEDIRNKINNASTLQEVEDIYLPYKKKRKTKAQKAVAN
GLEPLAKWLLRVNSDAPMVEAKKYLNKEVPDEEVALNGAVDILAEAFGEEAQLRDWVRKQ
MSRKGVLIAKEKDSEKDENGTYEDYYDFEQVVSKLTSYRILAINRGEKEGILRVKINTDD
DYALRYLHSRIIGSKKSTSNDYVERAYTEAYKKFIKPAIERELRATLTEKAENEAIKVFG
ENLYNLLMQAPLKNKIILGMDPAFRTGCKLAIIDETGKFLVKDVIYPHEKRKGEKPNSEL
RKEAAKKLETLINRYNVDMIAIGNGTASRESEKFVAEVLKKIDKEVYYVIVNESGASVYS
ASEVARDEFPDFNVEERSAVSIARRLQDPLAELIKINPESIGVGQYQHDLPQKQLDSEVE
ATVETAVNKVGVNLNTASIQLLTYISGLNKTTAQNIILYREENGKFQNRKELKKVPRLGP
KAYEQAAGFLRIIDGNESLDNTDIHPESYPLAEKLIKDLGITKEDMGTNTINDKLAKFNV
ERYALDNELEVITVKDIVKSLMKPGRDGRESMPMPLLKSDILKIEDLKAGMQLEGTVRNV
VDFGAFVDIGVKQDGLVHLSKLSKKYVSNPRDVVAVGQIVTVRVEDVDLNRKRIQLTMVN
PNE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaagttttaaaattaactaatgctgaattaaagtataatcctaaaaaaata
gaaaaagtaattgaattgctagaagaaggaaatactattccttttatagctagatataga
aaagaactaactggaagtttagatgaagtccaattaagagaaatccaagtaacttatcaa
agaaatgaaaagatagaaatacgtaagagtgaagttcttaagaaaatttcagaacagaat
aaacttacagaagatataagaaataaaataaataatgcaagtactcttcaagaggtcgaa
gatatttatttaccttataagaagaaaagaaaaactaaagcacaaaaggcagttgcaaat
ggattagaaccattagctaagtggttattgagagtaaatagcgatgcgccaatggtagaa
gctaagaagtatcttaataaagaagtacctgatgaagaagttgccttaaatggtgctgtt
gatattttagcagaagcatttggtgaagaagcacaattaagagattgggtgcgaaagcaa
atgtctagaaaaggagtattaattgctaaggaaaaagatagtgagaaagatgaaaatggc
acctatgaagattactatgattttgaacaagtagtgtctaaattaacatcatatcgaatt
ctagcaattaatcgcggtgaaaaagaaggaattttacgagtaaaaataaatacagatgac
gattatgcgctaagatatttacattctagaataattggtagtaagaaaagtacaagtaat
gactatgtagaaagggcatatactgaagcgtataaaaaatttatcaaacctgccattgaa
agagagcttcgagcaactttaactgaaaaagccgaaaatgaggctattaaagtttttggt
gaaaatttgtataatttattaatgcaagcccctttgaaaaataaaattattttaggaatg
gatccagcatttagaactggttgtaagttggcgattattgacgagactggaaaattttta
gttaaagatgtgatttatccacatgaaaagcgtaaaggcgagaaaccaaattctgaatta
agaaaagaagctgctaaaaaattagagacattgataaatagatataatgttgacatgata
gcaattgggaatggtacagcaagtcgagaatcagaaaaatttgtagcagaagttttaaag
aagatagataaagaagtatattacgtaattgtaaatgaatcaggagcttctgtatattca
gcaagtgaagtagcaagagatgaattcccggattttaacgtagaagaacgttcggccgta
agtatagctcgaagattgcaagatcctttagcagaattaataaagattaatcctgaatca
attggtgtgggacaataccagcatgatttaccacaaaaacaattagatagtgaagttgaa
gcgactgttgaaactgcagttaataaagttggtgtgaatttgaatacagctagtatccaa
ttactaacctatatttctggattgaataaaacaacagctcaaaatattattctttatcgt
gaagaaaacggaaaatttcaaaatcgaaaagagttaaaaaaggttcctagattaggtcct
aaagcttatgagcaggcggcaggctttttaaggattattgatgggaatgagtctctagat
aatacagatatacatccagaaagttacccgctagcagaaaaattgataaaggatctaggc
attactaaagaagatatgggtactaacactataaacgataagttagcaaaatttaatgtt
gaaagatatgcactagataatgaattagaagtaataactgttaaagatattgtaaaaagt
ttgatgaaaccagggcgcgatggtcgagaaagtatgccaatgcctttattgaaatcagat
attttaaaaatagaagatttaaaggcaggaatgcaactagagggtacggtaagaaatgtt
gttgattttggagcatttgttgatattggtgtaaaacaagatggactagtgcatttatca
aaactaagtaagaaatatgtttctaatccacgagatgtagttgctgtaggacagatagtt
actgttcgggttgaagatgttgatttaaatagaaagagaattcaattaacaatggtaaat
ccaaatgaataa
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