KEGG   Ligilactobacillus salivarius JCM1046: LSJ_1343c
Entry
LSJ_1343c         CDS       T03340                                 
Name
(GenBank) Putative HsdR,a host restriction; endonuclease R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lsj  Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:lsj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lsj02048]
    LSJ_1343c
Enzymes [BR:lsj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LSJ_1343c
Prokaryotic defense system [BR:lsj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LSJ_1343c
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N T1R_D3-like Helicase_C NPHP3_N
Other DBs
NCBI-ProteinID: AIR11003
UniProt: A0A089QGN7
LinkDB
Position
complement(1369232..1372306)
AA seq 1024 aa
MSKSFNELSRVQLPAVLHLIKLGYKYLSYKENKDRLDSDNNIVVPIFKKQFLNLNPEANE
EDFEKEYQDIKLELNFDDLGRSFFNRLQGQGNSQYRLIDWENFDNNSFHMAIEVPCINGE
EEFRPDITIFINGLPLTYIEVKQPNAIRNGMTGMKSEFERMGTRFKNKKYRAFHNITQLI
AFSDNMDYADDDGQQMQGSYYATTSLNKAVFNSMHEERYGELVDQIGTVSEEDIDYVLKD
TNKIVLKNTAEFKSNCDANTPLNRFLTSIYTKDRLAFFLHFGIVYVDATTKDGKPTIQKH
IMRYPQYFATRKISEKINEGMKKGVIWHTQGSGKTALAYFNVRYLKYKFQQNNLIPRFYF
VVDRLDLATQASKEFRKRGLTVKLISSKRQLNEAFAEDIAVVNIQKVNEDTDLTNKSGYA
LNTQNVYFIDEAHRSYNEKGSYLPNLYNADKNSIKIALTGTPLISVDGKNGKKSRATTRE
IFGDYIHKYYYNQSIEDGYTLRLLREEIATSYKKKLSDVLSSISGEVEKGSLDKTTLYSH
PHFVGPMLEYILNDFTKSRDIYDDQTIGGMIVSQSSAQAREIYKQFMHKRKLGETNLTAS
LILSDEDDKETRAKEVDDFKSGKTDLLIVYNMLLTGFDAPRLKKLYLGRMIKAHNLLQTL
TRVNRPYKDFRMGYIVDFANISHEFDKTNHAYFEELNQEYNKDTTDEELQNIYGSLFVPS
TEIEASLKNAKIILAEYTTDNLEQFSQEVNETPEKKDLLELAKTLKELKQYYNISRLIGY
TELTDQIKDLDVAKLLTVVTNRIATLNLLVNAKDDSSEKLLKLAMNKMDFSFKKVGEAEL
ELAANDFMERQRKAAAGLGRNWDQTDPEWISLYDEFTRILQKQHIGELSAKETQLNTTAL
DKVIIQINNLNARNRKIATAFDGDRKYARVYKHVIYSQKKQMPTSVREEPGLYRVMLRAK
KDIDDKVAMNQSMVENQGYFTNESIATIRNSSRQEQVKIAPMQVKVVSQLLTDEYEKELE
MLGV
NT seq 3075 nt   +upstreamnt  +downstreamnt
gtgagcaagagtttcaatgaattatctcgtgtgcaactacccgctgtgttgcacttaata
aagttgggatataaatatttatcatataaagaaaataaagataggcttgattcggataac
aatattgtcgtgcctatctttaaaaaacaatttttgaatttaaaccctgaagccaatgaa
gaagattttgaaaaagaatatcaagatatcaagctggagctgaactttgatgacttggga
cgatccttttttaatcggcttcaaggacaagggaactcacagtaccgattaattgattgg
gaaaactttgataataacagtttccatatggcaatagaagttccttgcatcaatggtgag
gaagaattcaggccggatattacaatttttattaacggcctaccattaacgtatattgaa
gtaaaacaaccaaatgcaattcgaaatggcatgaccggtatgaagtcagaatttgaacga
atggggactcgatttaaaaataagaaataccgagctttccataatattacacagttgatt
gccttttcggataacatggattatgccgatgatgatgggcaacaaatgcaaggctcctac
tatgcaaccaccagcttgaataaagctgttttcaattcaatgcacgaagagcgctatggc
gaactggttgatcaaattggaacagtatccgaagaagatattgattatgtcttaaaagat
accaataaaatcgtcttgaaaaatacagcagaatttaagagtaattgtgatgctaacact
ccactcaatagatttttgacttcgatatatactaaggatcgcttagcatttttcttacac
tttgggattgtatatgttgatgctactactaaagatggtaagcctactatccagaagcac
attatgcgttacccacagtactttgctactcggaagatatccgaaaaaattaatgaagga
atgaaaaaaggtgtcatttggcatacacaaggctcgggaaaaacggctttagcctacttt
aacgttaggtacttgaagtacaagttccagcaaaataatcttattcctcgcttctatttt
gtggttgaccggttagatttggcaacgcaggcaagtaaagaattccggaagcgtggctta
actgtcaaattgatttcaagtaaaaggcagttgaacgaagcattcgccgaagacattgca
gttgttaatattcaaaaggttaatgaagatacggacttaaccaacaagtcaggttacgca
ttaaatacacaaaatgtctatttcattgacgaagctcaccgttcttataacgaaaaggga
tcatatttgccaaacctctataatgccgataaaaactctatcaagattgctttgacaggg
acgccactaattagtgtagacggtaaaaatggtaagaagagtcgggcaacaacccgtgaa
atatttggagactacatccacaagtattactacaaccaatcaattgaagatggatatacc
ttgcgtttgctccgagaagagattgctactagctataagaaaaaattgtctgatgtttta
agcagcatttctggagaagtagagaagggaagtctggataaaacaactttgtattcacat
ccccattttgtaggaccaatgttggagtatattctaaatgatttcactaagtctcgtgat
atttacgatgatcaaacaataggaggaatgattgtcagtcagtctagcgctcaggctcgt
gaaatatataaacaattcatgcacaaacgtaaactgggagaaaccaaccttactgcgtcc
ctgattctttcagatgaagacgataaggaaacccgggctaaagaggttgatgattttaag
agtggaaaaacagatctcttaattgtgtataacatgcttttaactggttttgatgctcca
cgattaaagaagttgtacttgggacgaatgattaaagctcataatctgttgcagactttg
acgcgtgttaaccgtccatataaggatttcagaatgggatatattgttgactttgctaat
atttctcatgaatttgataagaccaaccacgcttattttgaagaattgaatcaggaatat
aacaaagatacaacggatgaagaattacaaaacatttatggttccctgtttgttccatca
acagaaattgaagctagtctgaaaaatgcaaagattattttggcggaatacactacagat
aacttggagcaatttagtcaggaagttaacgagacaccagaaaagaaagatctgttagaa
ttagctaaaaccttgaaagaactgaaacaatactacaatatcagccgattaataggctat
actgaattaactgatcaaatcaaggatctggatgtagcaaaactactgacggtggtgact
aatcggattgcaaccttaaatctactggttaatgccaaggatgatagcagtgaaaaattg
ctaaagttggcaatgaacaagatggactttagcttcaagaaggttggtgaagccgagcta
gaattagcagctaatgactttatggagcgtcaacgcaaggcagctgctggattagggcgt
aactgggatcaaactgatccagaatggattagcttgtatgatgaatttactcgaattctg
caaaagcaacatattggagaattgtcggctaaagaaacgcagctcaacacaacagcctta
gataaagtcattattcagattaataacttgaatgctcgaaaccgaaaaattgcgacagcg
tttgacggcgatcgcaagtatgcgcgggtatataaacacgttatttatagccaaaagaag
caaatgccaacttccgttagagaagaaccgggactttaccgggtaatgctacgagctaag
aaagatattgatgataaggtagctatgaatcaaagtatggttgaaaaccaaggctacttt
actaatgaatcaattgccacgattcgtaatagtagtcgccaagaacaggttaagattgca
ccaatgcaagttaaagttgtttcacagttattaactgatgaatacgaaaaagaattagaa
atgctaggagtgtga

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