Ligilactobacillus salivarius JCM1046: LSJ_1370c
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Entry
LSJ_1370c CDS
T03340
Symbol
trmA
Name
(GenBank) tRNA (Uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsj03009
]
LSJ_1370c (trmA)
Enzymes [BR:
lsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LSJ_1370c (trmA)
Ribosome biogenesis [BR:
lsj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LSJ_1370c (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
TRM5-TYW2_MTfase
PrmA
Methyltransf_25
MTS
Cons_hypoth95
Methyltransf_11
RrnaAD
TRM
N6_Mtase
OST-HTH
N6_N4_Mtase
Methyltransf_23
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AIR11030
UniProt:
A0A089QE55
LinkDB
All DBs
Position
complement(1400540..1401913)
Genome browser
AA seq
457 aa
AA seq
DB search
MKKKLPVSKNEDLILTIEDLTYQGMGVAKVDGYPLFIEGALPQEKIKAHVVKVTKNYGFA
KVIDFIEKSPDRVENEDKIYLQTGIAPLQNLSYPAQLKFKRKLVTDLLQKVHLDNLEVAN
TLGMETPYYYRNKAQVPVREVNGKLEIGFFKRNSHDFVAMEHFLIQDKRIDEILLKVRDI
LRMSKITAYDEEKHTGMIRHILVRRGYYSHEAMVVLVSRVRKIPNLEQIAFLIQQQCPDV
KSVMLNVNPDKTNVILGKKTIKLAGKDTIQDTLNGLKFDISAQSFYQVNPQQTEKLYQLA
IENAELTGKETVIDAYCGIGTISLNMAKFAKKVYGVEIVPEAIEDAKHNASLNDLENLDF
EVGEAEVWMEKWQKQGIKPDVIMVDPPRKGLTSSLIQSAVAMEPKKVVYVSCNPATLVRD
IQEFMELGYQVTKPIQPVDQFPQTTHVESVTVLELRK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaattacctgttagtaaaaatgaagatttaattttaacaattgaagactta
acttatcaaggaatgggtgtggctaaggtagatggttatcctttatttatcgaaggtgca
ttacctcaagaaaaaattaaggcacatgtggttaaagttactaagaattatggctttgct
aaagtgatagattttattgaaaagagtccggatagagtagaaaatgaagataaaatatat
cttcaaacaggaatcgctccactgcaaaacttaagctatcctgcacaattgaagtttaaa
cgtaaattggtaactgatttgttgcagaaggtacatttggataatttagaagtagcaaat
actttagggatggaaacaccttactattacagaaataaagcacaagttccagtaagagaa
gttaatggtaagttggaaattggatttttcaaacgtaacagtcatgattttgtagcaatg
gaacatttccttattcaagataagagaatagacgaaattttgctaaaagtaagagatatt
ttacgtatgagcaaaattactgcttatgatgaagaaaaacacactggaatgatacgccat
attttagtaagaagaggatattattctcatgaggcgatggtagttctagttagtcgagta
aggaaaattccaaatcttgagcaaattgcattcttaattcaacaacaatgtccagatgta
aagagcgtaatgctgaatgtaaatccagataagacaaacgttattttaggaaagaaaact
ataaaattagctggtaaagatacaattcaagatactttgaatggcttgaaatttgatatt
tcagcacaatctttctaccaagttaatccacaacaaactgaaaaattgtatcaattagcg
attgaaaacgcagaattaacaggaaaagaaactgttattgatgcatattgtggaattgga
acaatctcattaaatatggctaagtttgctaaaaaggtatatggtgtagaaattgtccct
gaagccattgaagatgctaagcataatgctagtctaaatgatttagaaaacttggacttt
gaagttggagaagctgaagtatggatggagaaatggcaaaaacaaggaattaagccagat
gtaataatggttgatcctccaagaaaaggactaacttctagcttgatacaaagcgcagtg
gcgatggaacctaaaaaagtcgtttatgtaagttgtaacccagcaactctagtacgtgat
attcaagaattcatggaactaggatatcaagttacaaagcctattcagccagtagatcag
ttcccacaaacaacgcatgttgagagcgtaacggtgcttgaactgcgaaagtag
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