| Entry |
|
|---|
| Symbol |
pcrA
|
|---|
| Name |
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
|
|---|
| KO |
|
|---|
| Organism |
lsj Ligilactobacillus salivarius JCM1046
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lsj00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSJ_1377c (pcrA)
03430 Mismatch repair
LSJ_1377c (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lsj03400]
LSJ_1377c (pcrA)
Enzymes [BR:lsj01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSJ_1377c (pcrA)
DNA repair and recombination proteins [BR:lsj03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSJ_1377c (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LSJ_1377c (pcrA)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(1409573..1411807)
|
|---|
| AA seq |
744 aa
MTDNMFLSGMNDKQSEAVLCTEGPLLIMAGAGSGKTRVLTHRVAYLIEEKGVNPWNILAI
TFTNKAAREMRERVNNLMGEGAEDIWVSTFHALCVRILRRDAEKIGFNRSFTIASTSEQR
TLMKQVLNDLNIDTKKYDPRAILSVISNAKNDLLDPKDYARQANGPFEEIVSKAYFEYQN
QLANNQAMDFDDLIMQTIRLFNESPEILEFYQRKFHYIHVDEYQDTNEAQYELVNKLARK
YRNLCVVGDADQSIYGWRGANMENIMNFEEDYPDATVIKLEQNYRSTKNILAAANNVIEN
NVNRKDKTLWTDNKQGDKIHYYRANNANEEAYYVVKKIQEQIRNNGRHYGDFAILYRTNA
QSRIIEETFVKTNIPYKLVGAHKFYDRKEIMDTLAYLRLVTNPADSMNFERIVNEPKRSI
GSVTVGKLRTFSQIHGMSMLEASKSAALAGVSAKASNELEKFAEMIEQLHEYQKAHNVTE
VTERILDVTGYKANLQREDTLENRNRLENLEEFLTVTKQFDQDWEPEDEESDPFVDFLAD
LALVSDQDSVEEEPDEVTLMTLHAAKGLEFPVVFLMGLEEGIFPLSRAVMDENELEEERR
LAYVGITRAEEELYLTNSISRMLYGKSQNNPASRFIEEIDEELIQSDNQTVASTTLTSKR
TRSREVPFSKKPKYRMPAGTVERPKETGADKQSWNIGDKISHKAWGTGTIVKVSGDGEDT
ELDIAFEGKGIKRLLAAFAPITKI |
|---|
| NT seq |
2235 nt +upstreamnt +downstreamnt
gtgaccgacaatatgtttttgtcaggaatgaatgataaacaatcagaagcagttttatgt
acagaaggaccattattaataatggcaggagctggtagtgggaagactcgtgtgttaact
caccgtgtagcatacttgattgaagaaaaaggcgtaaatccttggaacatactagctatc
acctttacaaacaaagcagctcgtgaaatgagagaacgtgtaaataatttaatgggtgaa
ggtgcagaagatatatgggtatctacattccatgctttatgtgtacgaattttacggaga
gacgcagaaaaaataggctttaataggtcatttacaattgcaagtacaagtgagcaaaga
actttaatgaaacaggttcttaatgatttaaatattgatactaaaaaatatgatccacgt
gcaatcttaagcgtaatttcaaatgccaaaaatgacctattagatcctaaagattatgcc
cgacaagctaatggaccatttgaagaaattgtaagtaaagcatattttgaatatcaaaat
cagcttgcaaataaccaagcaatggattttgatgatttaatcatgcaaactattagatta
ttcaacgaatcaccagaaatattggaattttatcaacgtaaattccactatattcatgtt
gatgaatatcaagatactaacgaagctcaatatgaattagttaataagttagctcgtaaa
tatcgcaatttatgtgttgtaggtgatgcagatcaaagtatttatggttggcgtggtgca
aacatggaaaatatcatgaactttgaagaagattacccagatgcaacagtaattaaattg
gaacaaaattatcgttctacaaaaaatattttagcagctgctaataatgtgattgagaat
aacgtaaatcgtaaagataagactttatggacagataataagcaaggtgacaagatccat
tattatcgtgcaaataacgctaatgaagaagcttattatgtagttaaaaaaattcaagaa
caaattagaaataatggacgtcattatggagattttgctattttatatcgtactaacgca
cagtcacgtataatcgaagaaactttcgtgaaaaccaatataccatataaattagttgga
gcgcataaattctatgatcgcaaggaaataatggacactttagcttatttacgtttagta
actaatccagctgattctatgaattttgaaagaatagtaaatgaaccaaaacgtagtatc
ggctcagtaactgttggaaaattaagaacattctctcaaattcatggtatgtcaatgtta
gaagcttccaagagtgctgctttagcaggggtatctgccaaggcaagtaatgaattagaa
aagtttgctgagatgatagaacagttacatgaatatcaaaaggcacataatgttactgaa
gttacagaaagaattctagatgtaacgggttataaagctaacttacaaagagaagatact
ttagaaaaccgtaatcgtttagaaaacttggaagaatttttaacggttactaagcaattt
gatcaagattgggaacctgaagatgaagaaagtgatccatttgttgatttcttagctgat
ttagctttagtttcagatcaagatagtgtagaagaagaaccagatgaagtcacattaatg
acattacatgcagcaaaagggctagaattcccagttgtatttttgatgggattagaagaa
ggtattttcccactttctagagcagttatggacgaaaatgaactcgaagaagaacgtaga
ttggcctatgtagggataactcgtgctgaagaagaactttatttaactaactcgatttct
cgtatgttgtatggtaagagtcaaaataatcccgcttctcgttttattgaagaaattgat
gaagaattaatccaatcagataatcaaacggtagcaagtacaacattaacatccaagaga
actagatctagagaagtgccatttagtaagaagcctaaatatcgtatgccagcaggaact
gttgaacgccctaaagaaactggtgctgacaaacaaagctggaatataggagataagatt
tctcataaagcttggggaacaggaacaattgttaaggtctcaggcgatggcgaagataca
gaactagatattgcttttgaaggtaaaggtattaaacgattactagcagcattcgcacca
attacaaagatataa |
|---|
