Ligilactobacillus salivarius JCM1046: LSJ_1377c
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Entry
LSJ_1377c CDS
T03340
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03420
Nucleotide excision repair
lsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSJ_1377c (pcrA)
03430 Mismatch repair
LSJ_1377c (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_1377c (pcrA)
Enzymes [BR:
lsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSJ_1377c (pcrA)
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSJ_1377c (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LSJ_1377c (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
FWWh
ResIII
Terminase_6N
DUF7233
Motif
Other DBs
NCBI-ProteinID:
AIR11037
UniProt:
A0A089RWW9
LinkDB
All DBs
Position
complement(1409573..1411807)
Genome browser
AA seq
744 aa
AA seq
DB search
MTDNMFLSGMNDKQSEAVLCTEGPLLIMAGAGSGKTRVLTHRVAYLIEEKGVNPWNILAI
TFTNKAAREMRERVNNLMGEGAEDIWVSTFHALCVRILRRDAEKIGFNRSFTIASTSEQR
TLMKQVLNDLNIDTKKYDPRAILSVISNAKNDLLDPKDYARQANGPFEEIVSKAYFEYQN
QLANNQAMDFDDLIMQTIRLFNESPEILEFYQRKFHYIHVDEYQDTNEAQYELVNKLARK
YRNLCVVGDADQSIYGWRGANMENIMNFEEDYPDATVIKLEQNYRSTKNILAAANNVIEN
NVNRKDKTLWTDNKQGDKIHYYRANNANEEAYYVVKKIQEQIRNNGRHYGDFAILYRTNA
QSRIIEETFVKTNIPYKLVGAHKFYDRKEIMDTLAYLRLVTNPADSMNFERIVNEPKRSI
GSVTVGKLRTFSQIHGMSMLEASKSAALAGVSAKASNELEKFAEMIEQLHEYQKAHNVTE
VTERILDVTGYKANLQREDTLENRNRLENLEEFLTVTKQFDQDWEPEDEESDPFVDFLAD
LALVSDQDSVEEEPDEVTLMTLHAAKGLEFPVVFLMGLEEGIFPLSRAVMDENELEEERR
LAYVGITRAEEELYLTNSISRMLYGKSQNNPASRFIEEIDEELIQSDNQTVASTTLTSKR
TRSREVPFSKKPKYRMPAGTVERPKETGADKQSWNIGDKISHKAWGTGTIVKVSGDGEDT
ELDIAFEGKGIKRLLAAFAPITKI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaatatgtttttgtcaggaatgaatgataaacaatcagaagcagttttatgt
acagaaggaccattattaataatggcaggagctggtagtgggaagactcgtgtgttaact
caccgtgtagcatacttgattgaagaaaaaggcgtaaatccttggaacatactagctatc
acctttacaaacaaagcagctcgtgaaatgagagaacgtgtaaataatttaatgggtgaa
ggtgcagaagatatatgggtatctacattccatgctttatgtgtacgaattttacggaga
gacgcagaaaaaataggctttaataggtcatttacaattgcaagtacaagtgagcaaaga
actttaatgaaacaggttcttaatgatttaaatattgatactaaaaaatatgatccacgt
gcaatcttaagcgtaatttcaaatgccaaaaatgacctattagatcctaaagattatgcc
cgacaagctaatggaccatttgaagaaattgtaagtaaagcatattttgaatatcaaaat
cagcttgcaaataaccaagcaatggattttgatgatttaatcatgcaaactattagatta
ttcaacgaatcaccagaaatattggaattttatcaacgtaaattccactatattcatgtt
gatgaatatcaagatactaacgaagctcaatatgaattagttaataagttagctcgtaaa
tatcgcaatttatgtgttgtaggtgatgcagatcaaagtatttatggttggcgtggtgca
aacatggaaaatatcatgaactttgaagaagattacccagatgcaacagtaattaaattg
gaacaaaattatcgttctacaaaaaatattttagcagctgctaataatgtgattgagaat
aacgtaaatcgtaaagataagactttatggacagataataagcaaggtgacaagatccat
tattatcgtgcaaataacgctaatgaagaagcttattatgtagttaaaaaaattcaagaa
caaattagaaataatggacgtcattatggagattttgctattttatatcgtactaacgca
cagtcacgtataatcgaagaaactttcgtgaaaaccaatataccatataaattagttgga
gcgcataaattctatgatcgcaaggaaataatggacactttagcttatttacgtttagta
actaatccagctgattctatgaattttgaaagaatagtaaatgaaccaaaacgtagtatc
ggctcagtaactgttggaaaattaagaacattctctcaaattcatggtatgtcaatgtta
gaagcttccaagagtgctgctttagcaggggtatctgccaaggcaagtaatgaattagaa
aagtttgctgagatgatagaacagttacatgaatatcaaaaggcacataatgttactgaa
gttacagaaagaattctagatgtaacgggttataaagctaacttacaaagagaagatact
ttagaaaaccgtaatcgtttagaaaacttggaagaatttttaacggttactaagcaattt
gatcaagattgggaacctgaagatgaagaaagtgatccatttgttgatttcttagctgat
ttagctttagtttcagatcaagatagtgtagaagaagaaccagatgaagtcacattaatg
acattacatgcagcaaaagggctagaattcccagttgtatttttgatgggattagaagaa
ggtattttcccactttctagagcagttatggacgaaaatgaactcgaagaagaacgtaga
ttggcctatgtagggataactcgtgctgaagaagaactttatttaactaactcgatttct
cgtatgttgtatggtaagagtcaaaataatcccgcttctcgttttattgaagaaattgat
gaagaattaatccaatcagataatcaaacggtagcaagtacaacattaacatccaagaga
actagatctagagaagtgccatttagtaagaagcctaaatatcgtatgccagcaggaact
gttgaacgccctaaagaaactggtgctgacaaacaaagctggaatataggagataagatt
tctcataaagcttggggaacaggaacaattgttaaggtctcaggcgatggcgaagataca
gaactagatattgcttttgaaggtaaaggtattaaacgattactagcagcattcgcacca
attacaaagatataa
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