Ligilactobacillus salivarius JCM1046: LSJ_1429c
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Entry
LSJ_1429c CDS
T03340
Symbol
sbcC
Name
(GenBank) Exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_1429c (sbcC)
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LSJ_1429c (sbcC)
Archaeal homologous recombinant proteins
LSJ_1429c (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND_NTPase5
AAA_21
ABC_tran
HTH_Cic_C
Motif
Other DBs
NCBI-ProteinID:
AIR11083
UniProt:
A0A089QGV8
LinkDB
All DBs
Position
complement(1468570..1471671)
Genome browser
AA seq
1033 aa
AA seq
DB search
MKPLKLRMKYFGPYIDETMNFTEFDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSGDER
DAKQMRSDFATPNDATEVTFVFEHNGIKYTVIRSPKMNLAKKRGNGTRDVEASVKVKYIN
KEQENIEITKKNQADKFLRDLIGLDAQQFTQIVLLPQGKFRNFLNANSADREKILRKLFG
TSLYQKWTEKIQEQAKIIESENEKLTTQIQTIRQQVEIEDNDETNDEEWIVKVNNQIEEK
KKKQEKVNNDITISQKQLDNLVETYQNEKVLADSIKQKEDYIHKLQSLENNQDKIELKKI
YAYRLAWYQKNQQIFNNKTDLELQIKEKSDKLVLLNQESKFLIQKHETAKIEAQELEKQQ
ENIEDLKNKISTLEVKLPVYQDVKVNQEKMSELAKNHQDTKNNLDKSVKELEKQKVSYDD
LGKELAKLENLDEKQVELVNENNKLTRLSEKIDLVDHLDSEIESKKLQKEKLEKKYQEQE
ELVQESTDTEEKLNTLWIKNQIYFLAKQLAPGEPCPVCGSKEHPLPAEIDELEQVTEEDV
KLANKKAEVERSKAKEFKLRLTSIIDEITELEQNKKESIDKILLDFELGKKHSLLELKEI
FQIKNDEYQKKAKDLENKVSLKEKLKGNSQLIKNEIANLEKEKDKLKEQYDDVYYRLKMT
ETTLQEQRKQLSPEFKDVKQVEEYITDTKKRVEDYQTNKDKITKELQDTKAELIKVQADI
DSNHQELESKKKGLSKINKEITTLIENSEINLEEIASLAKNLARLDSINNEINSYEKQIL
VVKTKISELDKTINNREMPNLVERNNVIVDKRKELATFQAEFSDITTEINHIQKIKQEVE
QLLREQKENYKLMAEWKQLSDVMTGKSATKLSLERYVLQMYLQRVLNVANGRLKELTQGR
YSFQIKDEKGSYSSNTGLEINIYDDNAGKVRPVQTLSGGESFIAALALALALGEVIQANA
GGIFVDALFVDEGFGSLDSDALQIALEALQTIEGKNRMIGIISHVKELQEQIPFQVKISS
NYGKSKISYRKDF
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattaaagttaagaatgaagtactttggaccatatattgatgaaacaatgaat
tttacagagtttgataatacacctttatttttaatcagtggaaaaacaggtagtgggaaa
acaaccatttttgatgctatgagttttgctttattcgatcatacttctggcgatgaaaga
gacgctaagcagatgagatctgattttgctacacctaatgatgcaactgaagtgacattt
gtatttgagcataatggaataaagtacacagttattcgtagccccaaaatgaatttagct
aaaaagagaggaaatggaactagagatgttgaggcttctgtaaaagtaaaatatatcaat
aaagaacaagaaaatatcgagattactaaaaaaaatcaggcagataaatttttacgtgac
ttaatcggcttggatgcacagcagtttacacaaattgttttattaccacaaggaaaattc
agaaatttcttgaatgctaatagtgctgatagagaaaagatattaagaaaattatttgga
acgagtctatatcaaaaatggactgagaaaatccaagaacaagcaaaaatcattgaaagt
gaaaatgaaaagttaacgacacaaatacagacaatccgacaacaagtagaaattgaagat
aatgatgaaacaaatgatgaagaatggatagttaaagttaataatcaaattgaagaaaaa
aagaaaaaacaagaaaaagtaaataacgatataactattagtcaaaagcaacttgataac
ttagttgaaacctatcaaaatgaaaaagtattagcggatagtattaagcaaaaagaggac
tatatacataaactacaatctctagaaaataatcaagataagattgaattaaagaaaatt
tacgcttatagattggcttggtatcaaaaaaatcaacaaatatttaacaataaaactgat
ttagaattacagataaaagaaaaaagtgacaaattggtgttactaaatcaagaaagtaaa
tttttaattcaaaaacatgaaactgcaaaaatagaagcgcaagagctagaaaagcaacag
gagaatattgaggatctaaaaaataagatttcaacattagaagtaaaattaccagtttat
caagatgtaaaagtaaatcaagaaaaaatgagtgaattagctaagaatcatcaagatact
aaaaataaccttgataagtcagtaaaagaactagaaaaacaaaaagtaagctatgatgat
ttaggaaaagaactagctaagttagaaaatttagatgagaaacaagttgagttggttaat
gagaataataaattaactagactgagtgaaaaaatagatttagtagatcatttagatagt
gagattgaatcaaagaaattacaaaaagaaaaattagaaaagaaatatcaagaacaggaa
gaattagtacaagaaagtacagatactgaagaaaagttaaatactttgtggataaaaaat
caaatttactttcttgctaaacaattagcaccgggagaaccttgtccagtatgcggatcc
aaagaacatccattaccagctgaaatagatgaattggaacaagtaactgaggaagatgta
aaattagcgaataagaaagctgaagttgaaagatctaaagcaaaagaatttaagttaaga
ctaacatctataatagatgaaataacagaattagaacaaaataaaaaagaaagtatagat
aaaatattacttgattttgaactagggaaaaaacattctttgctagaactaaaagaaata
tttcagattaaaaatgatgagtatcagaaaaaagcaaaagatcttgaaaataaagtcagc
ttgaaagaaaagttaaaaggtaacagtcaattaataaaaaatgaaatagctaatttggag
aaagaaaaagataaattaaaagaacaatatgatgatgtatattatcgcttaaaaatgacc
gaaactactctacaagaacaaagaaagcagttgagtcctgaatttaaagatgtaaaacaa
gttgaagaatatattacagatactaaaaagagagtggaagattatcaaacaaataaggat
aaaatcactaaagaacttcaagatactaaagcagaattaattaaagttcaagctgatatt
gatagcaatcatcaagaattagaaagtaagaaaaaaggactaagtaaaattaataaggaa
ataactacattaatagaaaatagtgagattaatttagaagaaatagcttccttagccaag
aatctagcacgattagattctattaataatgaaattaatagttatgaaaaacaaatatta
gtagtaaaaacaaaaatatcggaattggataaaacaattaataatagggaaatgccaaat
ttagttgaacgtaataatgtaattgttgataaaagaaaagaacttgcaacattccaagca
gaatttagtgatattacaacagaaattaaccatatacaaaaaataaagcaagaagtagaa
caattactgcgagaacaaaaagaaaattataagttaatggcagaatggaaacaattatca
gatgtaatgactggtaaaagtgctactaagttgagtttggaaagatatgtgctacaaatg
taccttcaaagagtgttaaatgttgctaatggacgtttgaaagaattaactcaaggaaga
tatagtttccaaataaaagatgaaaaaggtagttatagtagtaatacaggattagagatt
aatatatacgatgataacgctgggaaagttagaccagttcaaactttatcaggtggtgaa
agttttattgctgctttagctctagcactagctttaggtgaggttatccaagctaatgct
ggtggaatatttgtggatgctttatttgtagacgaaggatttggttccttggatagcgat
gcattacagatagcattggaagccttgcagacgattgaaggaaaaaatagaatgataggg
attatcagtcatgttaaagaattgcaagaacaaataccattccaagtaaaaatatctagc
aattatggaaaaagtaagataagttatagaaaggatttctaa
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