Ligilactobacillus salivarius JCM1046: LSJ_1441c
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Entry
LSJ_1441c CDS
T03340
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj03420
Nucleotide excision repair
lsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSJ_1441c (rep)
03430 Mismatch repair
LSJ_1441c (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_1441c (rep)
Enzymes [BR:
lsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSJ_1441c (rep)
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSJ_1441c (rep)
MMR (mismatch excision repair)
Other MMR factors
LSJ_1441c (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
SLFN-g3_helicase
PhoH
DEAD
NACHT
AAA_30
Glyco_trans_1_3
AAA_16
DUF4351
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AIR11095
UniProt:
A0A089QEB7
LinkDB
All DBs
Position
complement(1481355..1483646)
Genome browser
AA seq
763 aa
AA seq
DB search
MALTEKELEQKHMDDVVAKIKQAEKRHQSEINKVEQDRKDIMDDFKNNVRIKTGSYAGIM
ETGLTVRQQQQLLQERENSWQHATQRLEVLEKLEKKPYFARIDFTENDGKQESIYIGLGS
FADTPDHFMIYDWRAPISSIYYDGKLGEVTYDTPDGPQTAVLTLKRQFMVEDGKIITLFD
TDETVGDQMLLEVLDESSDIKMKSIVTTIQKEQNKIIRDTKSDLLFVQGAAGSGKTSAVL
QRVAYLLYRYRGNLSSSQVVLFSPNQLFNDYIDQVLPELGEQNMVQMTYYQYSQRRLPKI
HVETLQERFDEDNQPLRRKISALKSSLTMFNATTNYSDILNTAGMRFRDIKYNGEIFFSK
KDIKKIYYSFNSNYNLRNRLSATKEKLIKILNSKVGELAKQDSVQKQIQDLSREELNELY
GDEPRNFVNGDQELKFLARSYVMKQLRPVQRAIVRNRFLSINKQFVHFMRNIPELVDLAK
FDLTLEQWNDDVDMTISRLKNHKLTIVDVTIYLYLYDLITGKRGEVDIKHVFIDEIQDYT
AYQLAYLKFGFPRAKFTMLGDLNQAIFTKENSHTLLDELGTMFDKDKTKVIQLTQSYRST
QQITDFTKEVLVNGEKVTSFARKGSLPTITIDNDEEKLINDVVMQLHRNDADKMTTAIIG
KSLSECEKLTEKLKNKGAQVTLIKTENQRLVPGTIVVPAFLAKGLEFDAVIMWNANRNNY
HDESERQLVYTICSRAMHRLDIFAVKELTPLMDRVNPELYEML
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggctcttactgaaaaagaattagaacaaaaacatatggatgatgttgttgctaaaata
aagcaagctgaaaagagacatcaatctgagattaataaggttgaacaagatagaaaagac
attatggatgattttaaaaataatgtcagaattaaaacaggctcctatgctggaattatg
gaaactggtctaactgtaagacaacagcaacaacttttacaagaacgcgaaaatagttgg
caacatgcaacacagagattagaagttcttgaaaagttagagaaaaagccgtactttgct
agaatagatttcactgagaatgatggtaagcaggaatctatttatataggattaggttcg
tttgcggataccccagaccattttatgatttatgattggcgtgctccaatttctagtatt
tactatgatggtaaattaggagaagtaacgtatgatacacctgatggcccacaaacagca
gtattaactctaaaaagacagtttatggtagaagatggcaagatcataactttatttgac
actgatgaaactgttggggatcaaatgttattggaagttctagacgaatcttctgacatt
aagatgaagagcattgttactacgattcaaaaagaacaaaataagattatcagagatact
aagtctgacttgctatttgttcaaggtgctgcaggttcaggtaaaacatctgctgtatta
caaagagtagcatatctattgtatcgttatcgtggaaatttgagctcgagtcaagtggta
ttattttcaccaaaccagttatttaatgactatattgatcaagttctaccagaattaggg
gaacaaaatatggttcaaatgacttactatcaatattcacaacgtcgtctacctaagata
catgtagagacgttacaagaaagatttgatgaagataatcagccattaagaagaaaaatt
tcagctttaaaaagtagcttaacaatgtttaatgcgacaactaattatagtgatatttta
aatactgctggaatgagatttagagatataaaatataatggagaaatcttcttctctaaa
aaagatataaagaaaatttactatagttttaatagtaattacaatctacgtaatcgtttg
tctgctactaaagaaaaacttattaaaattctgaatagtaaggtaggagaacttgctaag
caagatagtgttcaaaaacaaatacaagatttaagtagagaagagctcaatgaattatat
ggtgatgagccacgtaattttgttaatggtgatcaagagctaaaattcttagcccgcagt
tacgttatgaaacaattacgtccagttcaaagagctattgtacgtaatcgctttttaagt
attaataaacagtttgttcatttcatgcgtaatattccagaactagttgatttagcaaaa
tttgatttaactttagaacagtggaatgatgatgtcgatatgacaatcagtcgtttgaaa
aatcataaattaacaatagttgatgtaactatttacctgtatttgtatgatttgattaca
ggaaaacgtggcgaagtagatattaagcatgtctttattgatgaaattcaagattataca
gcatatcagttagcatatttaaaatttggttttccacgtgctaaatttacaatgttaggt
gatttaaatcaggctattttcacgaaagaaaacagtcatacactgttggatgagctagga
acaatgtttgataaagataaaacaaaagttattcaattgacgcaatcatatcgttcaact
caacaaataacagattttactaaagaagtattagtgaatggagaaaaagttacatctttt
gctcgtaagggatcgttaccaactattacaattgataatgatgaggaaaaactgataaat
gatgtagttatgcaattgcatagaaacgatgcagataagatgactacggccattattggg
aaatctttatctgagtgtgaaaaattaactgaaaaattgaagaataaaggtgctcaagtt
actttaattaagactgaaaaccaacgcttagttccaggaacaattgtggtgccagcattt
ttagcaaaaggactagaatttgatgctgtaataatgtggaatgctaatagaaataattat
catgatgaaagtgaaagacaattagtttatacaatttgttctagagcgatgcatagatta
gatatattcgctgttaaagaattaacaccattaatggacagggtaaatccagaattgtat
gaaatgttataa
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