Ligilactobacillus salivarius JCM1046: LSJ_1448c
Help
Entry
LSJ_1448c CDS
T03340
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsj03016
]
LSJ_1448c (truA)
Enzymes [BR:
lsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LSJ_1448c (truA)
Transfer RNA biogenesis [BR:
lsj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LSJ_1448c (truA)
Prokaryotic type
LSJ_1448c (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIR11100
UniProt:
A0A089QEC2
LinkDB
All DBs
Position
complement(1490628..1491398)
Genome browser
AA seq
256 aa
AA seq
DB search
MTQRFKVTLAYDGTNFAGFQAQPNQRTVQFVLEKAINKMSKKDEYITVYGSGRTDSGVHA
LGQVVHFDFPHPISAKGMLRGLNSMLPLDCEVVDCKIVPNDFHSRYTTHGKRYLYRVSRG
EFVNPFKRLYTGHYKYPLDIEKIREAMPDVEGTHDYSSFVASGSQAKSHVRTIYEAKVYE
DKVNDEIVFEFYGNGFLYNQVRIMVATLLEIGNGKRPVHDFLRLYEVKDRSQARQTAPAS
GLYLKEVYYDEEDEKL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaagatttaaagtaacgttagcttatgatggtactaattttgctggttttcaa
gctcaacccaatcaaagaacagttcaatttgttctggaaaaagctattaacaaaatgagt
aaaaaggatgagtatataactgtttatggatcagggagaacagattctggagtacatgct
ttagggcaagttgtacattttgattttccgcatcctatttctgctaaaggtatgttgaga
ggattaaatagtatgttgccgctggactgtgaagtagtagattgcaaaatagtaccaaat
gattttcattcaagatatacaactcatgggaaaagatacttatatcgtgttagtagaggg
gaatttgtaaatccttttaagagattatatacaggacactataagtatcctttagatata
gaaaaaataagagaagcgatgccagatgttgaaggaacacatgattattcaagttttgtt
gcttctggtagtcaagccaaaagtcatgtaagaacaatttatgaagctaaagtttacgaa
gataaggtaaacgatgaaatagtttttgaattttatggaaatggatttttgtataatcaa
gttaggataatggtggcaacacttctggaaattggtaatggaaaaagaccagtacacgat
tttttgagattgtatgaagttaaggatagaagtcaagcaagacagacagcaccagctagt
ggcttatacttaaaggaagtatattatgatgaagaggatgaaaaattataa
DBGET
integrated database retrieval system
