Ligilactobacillus salivarius JCM1046: LSJ_1501c
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Entry
LSJ_1501c CDS
T03340
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsj03009
]
LSJ_1501c (rluD)
Enzymes [BR:
lsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LSJ_1501c (rluD)
Ribosome biogenesis [BR:
lsj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LSJ_1501c (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AIR11152
UniProt:
A0A089RX88
LinkDB
All DBs
Position
complement(1529397..1530311)
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AA seq
304 aa
AA seq
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MSKYKFERTVNAEFSGISLRALLSEKWLLPRKFIHFLRIRENVKINGNYYPMNTIVQGNQ
KIELIFEGDEFRTATSNYIVDKGRKIPIIFENEDLLVVNKPQGIKSHPNQPYEIGTLMNY
IAGYLDVKDEHPYMVHRLDMLTSGAMIVAKNPVVVPILTRLISTHTIKRDYLAVTEGIFD
QKEGVIDLPIGKDENDKRKRKVDGIGALPARTHYQVIKEFGNNSVVYLRLETGRTHQLRV
HLSAMGHPIVGDVLYNHVSEEKHMMLHGYKQKLTLPFSMRELELKADIPKYFTNYEEKVK
ESKN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtataaatttgaaagaacagtcaatgctgaatttagtggaatttcattacga
gctttattgtctgaaaagtggttacttccacgtaaatttatccattttttgagaattagg
gaaaacgtaaaaattaatggtaactattatccgatgaatacaattgttcaaggaaatcaa
aagattgaattaatctttgaaggtgatgaatttaggacagctacctcaaattatattgta
gacaaaggtaggaaaattccaattatttttgaaaatgaggatttattagtagtaaataag
cctcaaggaatcaagagccatcctaatcaaccatatgaaataggaactttgatgaattat
attgctggatacttagatgtaaaagatgaacatccttatatggtacatcgtttagatatg
ttgaccagtggggcgatgatagtggctaagaatccagttgtggtaccaatattgactcgt
ttgattagtacgcacacaatcaagcgtgactatttagctgtaacagaaggaatttttgat
caaaaagaaggagttattgatctaccaattggtaaggatgaaaatgataagcgtaagcga
aaagtagacggcataggcgcactaccagctagaacacattatcaagtaattaaagaattt
ggaaataattcagtagtttatttaagattggaaacaggaagaacgcatcaattacgtgta
catctatcggcaatggggcatcctattgtaggagacgtgttatataatcatgtaagtgaa
gaaaaacatatgatgttacatggctacaaacagaaattaactttaccattttcaatgaga
gaactagagttaaaggcagatatacccaaatattttacaaattatgaggaaaaagtaaaa
gagagtaaaaactaa
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