Ligilactobacillus salivarius JCM1046: LSJ_1559
Help
Entry
LSJ_1559 CDS
T03340
Symbol
treR
Name
(GenBank) Trehalose operon transcriptional repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsj03000
]
LSJ_1559 (treR)
Transcription factors [BR:
lsj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LSJ_1559 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_36
HTH_Crp_2
HTH_41
HTH_11
Rrf2
TrmB
HTH_Mga
HTH_28
Phage_rep_O
DUF6945
HTH_29
MarR_2
RP-C
rRNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AIR11208
UniProt:
A0A089QH74
LinkDB
All DBs
Position
1585466..1586179
Genome browser
AA seq
237 aa
AA seq
DB search
MVQSKHDMIAQDIASKIKYHQYKAGDYLPSEHQLCELYGTSRETIRKALNHLNELGLIQK
IRGKGSVVLDIQKFTFPISGITSFKELNRSLNMHAKTTVLKQVNTLAPKRFMDINIDNQQ
AIFVERLRTIDDLPVVLDQDYLLTPPVSSLPAGVAEDSIYEYLEKELHLEVSYATKAITV
EKAADDIAKKLQLDDDKLVVIVRSLSYLNDTTLFQLTSSYHRPDKFKFIDFARRKKI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttggttcaaagtaaacatgatatgattgcgcaagacatcgcttcaaaaattaaatatcat
caatataaagccggagattatctcccaagtgaacatcaactttgcgaactttatggaact
tctcgcgaaactattcgtaaagctcttaatcatttaaatgaattaggccttattcaaaaa
atacgtggtaaaggttctgtcgttttagatattcaaaaatttaccttccctatttctggg
attacaagttttaaggaattaaatagatctctaaatatgcatgctaagacaacggttcta
aagcaagttaacacattggctcctaaaagatttatggacattaatatcgataatcaacag
gcgatcttcgttgaacgtcttcgtactatcgacgacctacctgtagtgttagatcaagat
tatctacttacacctccagtttcttctttgccagctggtgtagctgaagactctatttat
gaatatttagaaaaagaattacatttagaagtatcctatgctactaaagctattacggtt
gaaaaagccgcagatgacatcgctaaaaagttacaactggatgatgataaactcgttgtt
atagtcagaagtctttcttatttaaacgacactacactattccaactaacatcttcctat
catcgccctgacaaatttaaatttattgactttgctcgtagaaaaaaaatctaa
DBGET
integrated database retrieval system
