Ligilactobacillus salivarius JCM1046: LSJ_1629c
Help
Entry
LSJ_1629c CDS
T03340
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Pathway
lsj00521
Streptomycin biosynthesis
lsj00523
Polyketide sugar unit biosynthesis
lsj00541
Biosynthesis of various nucleotide sugars
lsj01100
Metabolic pathways
lsj01110
Biosynthesis of secondary metabolites
lsj01250
Biosynthesis of nucleotide sugars
Module
lsj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LSJ_1629c (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LSJ_1629c (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LSJ_1629c (rfbC)
Enzymes [BR:
lsj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LSJ_1629c (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF2785
Motif
Other DBs
NCBI-ProteinID:
AIR11273
UniProt:
A0A089QHE8
LinkDB
All DBs
Position
complement(1675099..1675680)
Genome browser
AA seq
193 aa
AA seq
DB search
MGKLIVKETKLQDVKLITPAVFGDNRGFFTESYSDRDFKAAGIDFDFIQDNHSLSTQAGV
LRGLHFQRGKAAQTKLIRVATGAVLDVIVDLRKGSPTYKQWEGYILSESNHRQLLVPKGY
AHGFVTLTDNVNFLYKCDNYYDAEADGGISFKTPELNIDWPIDLDKAITSEKDANQPTLT
EFEKDNPFVYGEI
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaattaattgtaaaagaaacaaaattacaagatgttaaactaattacaccagct
gtatttggagacaaccgtggattcttcacagaaagttattcagatcgtgattttaaagct
gctggaattgattttgattttattcaagataatcactctctttctacacaagcaggtgtc
ttacgtggtttacattttcaacgtggtaaagctgcacaaacaaagttgattcgcgtagca
actggagcagttttagatgtaatcgttgatttacgtaaggggtctcctacatataagcaa
tgggaaggatacatcttatctgaaagtaatcatcgtcaattgttagtacctaagggttat
gctcatggatttgttactttgacagacaacgttaacttcctttacaaatgtgataattac
tatgatgcagaagctgatggtggtatttcctttaagactcctgaacttaatattgattgg
ccaatcgacttagataaggcaatcacatctgaaaaagatgctaaccaacctactttaaca
gaatttgaaaaagacaatccatttgtttacggcgaaatctag
DBGET
integrated database retrieval system
