Ligilactobacillus salivarius JCM1046: LSJ_1663c
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Entry
LSJ_1663c CDS
T03340
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_1663c
Enzymes [BR:
lsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSJ_1663c
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LSJ_1663c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
AAA_30
ResIII
DUF2059
EntA_Immun
DUF433
Motif
Other DBs
NCBI-ProteinID:
AIR11305
UniProt:
A0A089QEY8
LinkDB
All DBs
Position
complement(1704931..1708677)
Genome browser
AA seq
1248 aa
AA seq
DB search
MANGFKFTPAQQKAIEDTGKNILVAASAGSGKTRVLVERVINKIKQGVSIDELLVVTFTE
AAAKEMKERIQIALRKGLSTADSEEEKRRYLTQLSKLNVANISTLHAFCLQIIKQYYYVI
NLDPMFRMLTEDTEVALLQENVWDDLREKWYSKKSPEFENLVINFSSDRNDDGLSELVMK
TYQFANANPNPEEWLNNLVNEYELGDQPLMESNFYQNKIKPNILDQIQLAKDNLKQGMDE
ANKIGLEKLYQTFEQDCVTIDALQDFVVGCKEWNNLKTTLQNFKFKRAKSDRGLDDDQKK
QKERINKTLRDGSKKIIEDLSVKYFALPEDEIKELTQKSKQIVETLSEVVKEFGSEFSKE
KRRRHVLDFSDLEHLTLQILNTDTPDGRRVKERLKNKFKEIMVDEYQDTNQLQETILTTI
AHKNPGNMFMVGDVKQSIYGFRLADPGLFLKKYQSFATDDNDDERIILAENFRSMENVTA
FTNLIFSQLMDEKVGEMAYDEDARLVYGAKYYPEETPIKAEVLVYESEDSSQESNDEPVN
EDFSIDNKAQGQIVMTAKRIKELVENGEKIYDKKQGTIRPIEYRDIAILAPTRKNNLILT
EEFKRLGVPIFVPDAQNYFQTTELKIMMSFLQIIDNPYQDIPLVAVLRSPIVGLKENELA
YLRINDKTGDYFQAVESFYDNFEVEKASAFAQSLYEKIAIFLKQLTEFRNMAQQNELASL
IWKIYEETGFLDYVGGMPGGLQRQANLHALYERAAEYEEMSFKGLFQFVRFINKMQTKNK
DLSEATTQVSDDAVTVMTIHGSKGLEFPVVFLLDATHKFNVGDLNKPYLLNADDGIGISY
LDPDTRVKTDTLMKVIAGEQALKKLAAEQMRLLYVALTRAEQQLFIVGSYKDKNEALSKW
EKATQSESLVLNAGIRASVRNFMDWIGMCLTRSEIFKEVDDTVDAKEPAYIGELPVKFAV
KFYSNQDLRGENITLDENSESWLKQQLKKIEVQEPLEINDKQYRIIDKILQSKYPNESLT
KTTAYQAVSDLKRAFDDPDNNMMQSLEINWQDQVPQGINRYVQNELSLPKFMTTKVKVSP
AQVGTATHLLLQKLPLDDEVTLEELMQLLAQLVEDKLITPEVAKEINLNQIKVFYTSDLG
RKVLKNKDKVKRELPFAMIIPAGRLFSNVDNDVEQPILVHGIIDGLIELDDEVIIFDYKT
DHHTSEDKLIENYRGQLNLYAMAVESMLNKKVSQKIIYSLDLGKSIVL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggatttaagtttacacctgctcaacagaaagcaattgaagataccgggaaa
aatattttagtagctgcttcagctggatctggtaagacaagagtcttggttgaacgtgtt
attaataagatcaaacaaggagtaagcattgatgaattactcgtagtaacttttacggaa
gctgcagctaaagaaatgaaagaaagaattcaaattgctttgcgtaagggattatcaacg
gctgactctgaagaagaaaagcgtagatatctaactcagttatcaaaattaaatgtagct
aatatctcaacattacacgcattttgcttacagataattaagcaatattactatgtaatt
aatctagatccaatgtttagaatgctaacagaagatactgaagttgctttactacaggaa
aatgtatgggatgatttgcgtgaaaaatggtatagcaaaaaaagtccagaatttgaaaat
ttagtaatcaatttttctagcgaccgtaacgatgatggtctaagtgaattagtgatgaaa
acttatcaattcgctaatgccaatcctaatccagaagaatggctaaataatttagtaaat
gaatatgagttaggtgatcaacctttgatggaaagtaatttctatcaaaataagataaag
cctaatattttagatcaaattcaattagctaaagacaatttaaaacaaggaatggatgaa
gctaataagatagggttagaaaaactctatcaaacatttgaacaagattgtgtaacaatt
gatgcgttacaagattttgtagttggatgtaaggaatggaataatttaaagacaacttta
caaaatttcaagtttaaacgtgctaaatctgatagaggtctagatgatgatcagaaaaag
caaaaagaaagaattaacaagactttacgtgatggcagtaaaaagattatagaagatcta
agtgttaaatattttgctttacctgaagatgagatcaaagagctaacccaaaaatccaaa
caaattgttgaaactttaagtgaagttgtaaaggaatttggatcagaattcagtaaagaa
aaacgtagaagacatgtacttgattttagtgacttggaacatttgacactacaaatccta
aacactgatactcctgatggtagacgagttaaggaaagattgaaaaacaagttcaaagaa
atcatggttgatgagtaccaagatactaaccaactccaagaaacaattttaacaacgatt
gctcataagaatcctggcaatatgttcatggtaggggatgtaaagcaatctatttatggt
ttccgtttggcagatccaggattgtttttgaagaagtatcagagttttgcaactgatgat
aatgatgatgaaagaataattcttgctgaaaactttcgttcaatggaaaatgtaacagca
tttactaacttaatattctctcaattgatggatgaaaaagtgggagaaatggcatatgat
gaagatgctcgcctggtttatggagcaaaatattatccagaagaaacccctataaaagct
gaagttttggtatatgaaagtgaagattctagtcaagaaagcaatgacgaacctgtaaat
gaggacttttcaattgataataaagctcaaggccaaattgtcatgactgccaagagaatt
aaagaattagttgaaaatggagaaaaaatctacgataagaaacaagggactattaggcca
attgaatatcgagatattgcaattttagctccaactcgtaagaataacttgattttgaca
gaagaatttaagcgtctaggagtaccaatttttgttcctgatgcacaaaattatttccaa
acaactgaattaaaaataatgatgtcattcttacaaataattgataatccttaccaagat
attcctttagtggcagtgttacgttcaccgattgttggactaaaagaaaatgaactagct
tatcttagaattaatgataaaactggtgattatttccaagcggtagagagtttctacgat
aattttgaagtcgagaaagcttcagcatttgctcaaagtttatatgaaaagatagcaatt
ttcttgaagcaattaactgaatttagaaatatggctcaacaaaatgagttagcaagttta
atttggaaaatctatgaagaaactggtttccttgattatgttggaggaatgccaggtggg
ttgcaacgtcaagctaacttacatgctttatacgaaagagctgcagaatatgaagaaatg
agctttaaaggtttattccaatttgtacgtttcattaacaagatgcagactaaaaacaaa
gatttatcagaagctacaacgcaagtttctgatgatgcggttacagttatgactattcat
ggtagtaagggattggaatttccagttgttttcttattggatgctactcacaaatttaat
gtgggagatttgaataaaccatatttgttgaatgcagatgatgggataggaatttcttat
cttgatcccgatactcgagtaaagacagacactttgatgaaagtaattgctggtgaacaa
gcgttgaaaaaattagcagctgaacaaatgagattactatacgtagctttaacacgagca
gaacagcaattatttatcgttggttcatataaagataaaaatgaagctttgagtaagtgg
gagaaagctacgcaaagtgagtccttagttttgaatgcaggtattagagcatcagttaga
aacttcatggactggattggtatgtgtctaacaagaagtgagatctttaaagaagttgat
gatacagtagatgcaaaggaaccagcatatataggtgaattaccagtaaaatttgcggtt
aagttctatagtaatcaagatctacgtggagaaaatattactttagatgagaatagtgaa
tcttggttaaaacaacagcttaagaagatagaggtgcaagaacctttagaaattaatgac
aagcaatatagaattattgataaaattctacaaagtaagtatcctaatgaatcattaact
aaaacgactgcttaccaggctgtgtcagacttaaaacgagcttttgatgatccagataat
aatatgatgcaaagtctggaaattaattggcaagatcaagtacctcaaggcataaataga
tatgtgcaaaatgagttgagtttacctaagtttatgacgacaaaagtaaaggtatctcct
gcacaagtaggtactgcaacacatctactgttacaaaaattaccacttgatgatgaggta
acgcttgaagaattaatgcaattactagcacagttggtagaagataaattaataacacca
gaagtagctaaggaaattaatttaaatcaaattaaggtattttatactagtgatctaggt
agaaaagttctaaagaataaagataaagtaaaacgagaattaccatttgcgatgattata
cctgctgggagattatttagtaatgtggataatgatgtagagcagccaatcttagttcat
ggtattatcgacggattaattgagttagatgatgaagttattatctttgattataagact
gaccaccatacttccgaagataagttgattgaaaattaccgtggacaattaaacttatat
gcaatggcggttgaaagcatgttgaataagaaagtttcacaaaaaatcatatattcttta
gatctaggaaaaagcattgttctctaa
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