Ligilactobacillus salivarius JCM1046: LSJ_1664c
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Entry
LSJ_1664c CDS
T03340
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsj03400
]
LSJ_1664c
Enzymes [BR:
lsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSJ_1664c
DNA repair and recombination proteins [BR:
lsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LSJ_1664c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AIR11306
UniProt:
A0A089QK24
LinkDB
All DBs
Position
complement(1708682..1712263)
Genome browser
AA seq
1193 aa
AA seq
DB search
MSLGFILGDATKNHRQVLLDQITNWQAEDPQAKIYYIVPNHNKFSAEVKVLDYLKSQQDN
QDLFATSNVQTFSFTRLAWYFMKDTATYQVNRITNAGLNMIVYRSLQEHSDELTIFKGEQ
TQPGFIAQLVSQLIELQQSCITYDDIERMKENLSQQDTSDSAELEAKLHDIAIIYRDFMQ
MTDSKYLKPADILPSLTQYLQNEDLSNSYFIIEGFSQFTAQEQAIISVLLQRAKEVRIDL
ILNRGVTDIEDLSDKQSLFYRSERTYYLLYQQARKAQVKILNDVYPQELRVETPELQFLA
KYWKESTDLKPINVEKIGDNHNLQVIKADTRMTEIREIATRIKQMVALKGYRYADFLLLT
PDLNKYRNIIEPIFNDYKVPIFVDLAKKMIDHPLVELLTALFNVKARHYRYVDMMRLLKT
ELLIPKTEYGYLGIKQFRQDLDLTENLILKFGLEGSQWLRKDDWVYYRFGSSDFGTQTDV
QEKITKQVNVIRHYIKEILPPFFKQLDEAENGKEAAQILMNFLITNGVPEQLINWRNQAL
EQGDMMMADRPEQVWNLFCALMDEYVDTLGDLSFKEEDFLNLLQTGFEGATYRQVPSTLD
QVIISETTATQMNDRKVTFIFGATDLVMPNRIQNTMLLTDMDRELVQGTLDDEKYLSDTA
EERMAAEPFMNYLAFMTPRERLYFSYPVAGVNEDGLRMSPYVNRIMKQFDLPLYEANGEP
ALEDKKVLKFVATKRTALSNLIGVARQAKGQKQPLPVMWRYIYQKLQEDVTYRRLTRKLM
AGIEYSNIPERLKIEYAEKLYGKTLNTSVSKFEEFFKNHYAFFLKYGLKLKERDVFELSP
ANTGEFYHMALDKLLKTLKQDKVSIADINKPQFDSYLQQVLGGMEQLPQFQILQSSNRMQ
FILKQLGNTVSQMGWALHNQGQRTKMRPLETEVLFGHVGTENGLKALTYDLGNGHKVNVR
GKIDRIDQMIIDNQRYLGIVDYKSSSHKFNYQDAYYGLALQMLTYLNAMLQNTDLLLDLN
TGEEIKPAGAVYMHLQNPVIKQKDILKNPYSEVLLKQNKYDGLVLDDQELLSNLDTSIEK
SGNSIVYPVRKYADGHFGGVKNSGNVITFDNLMLLLKRNEELIQEAAKLIFAGDVALNPV
LWPDRRSALQYSPYKAIMQFDELLGNQYYRLPKENTADILQKLAQENTAESEV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaggatttattttaggtgatgctactaaaaatcatcgtcaagtattgctagat
caaattactaactggcaagcagaagatccacaagctaagatttactacatagttcctaac
cataataaatttagtgctgaagtaaaagtattagactatttaaaaagccagcaagataat
caagacttgtttgcgacaagtaatgtacagactttctcatttacacgtttagcttggtat
ttcatgaaagatacagctacatatcaagttaatagaataaccaatgctggcttgaatatg
attgtttatcgtagtttgcaggaacatagtgatgaattgacaatttttaaaggtgaacag
acacagcctggctttattgctcaattggtatcacaattgatagaactacaacaatcttgt
attacatatgatgatatagaaagaatgaaagaaaacttaagccaacaagatacatctgat
agtgcagagttggaagctaaattacatgatatagcgattatctatcgtgattttatgcaa
atgacggacagtaagtatttaaaacctgctgatattttgccaagtttgacccagtactta
caaaatgaagatctaagtaatagttattttattatcgaaggattttcacaattcacagct
caagaacaggctataatttcagttttgcttcaacgagctaaagaagtgagaattgatttg
attttgaatcgaggagtgactgatattgaagatttaagtgataagcagtcattattttat
cgatcagagagaacttactatttactttatcaacaggctagaaaagcacaggtaaaaatt
ctgaatgatgtttatccacaggaattacgtgtggaaactcctgaattacaatttttggct
aaatattggaaagaatccacagatttaaaaccaattaatgttgaaaaaattggggataat
cataatttgcaagtcataaaagctgatacaagaatgacggaaataagagaaattgccaca
agaataaaacaaatggtagctttaaaaggatatcgctatgcagatttcttattattgaca
ccagatttaaataagtatcgaaatatcattgaacctatttttaatgactataaggttcca
atctttgtggatttagctaagaagatgattgatcatccacttgtggaattgttgacagct
ttattcaatgtgaaagcacgtcactatcgttatgtggatatgatgaggcttttaaaaacc
gaattgttaattccaaaaaccgaatatggttacttgggaattaaacaattcagacaagat
ttagatttaactgaaaacttgatcttgaaattcggtttagaaggaagtcaatggttgcgc
aaagatgattgggtatactatcgctttggaagttccgactttggtactcaaactgatgtc
caggagaaaataaccaagcaagttaatgttatccgtcattacattaaggaaattttacca
ccattcttcaagcaattggatgaagctgaaaatgggaaagaagcagcacaaattttgatg
aacttcttgattactaatggggtcccagaacagttgattaattggagaaatcaagcacta
gaacaaggtgatatgatgatggcagatcgtcctgaacaagtgtggaacttattttgtgca
ttaatggatgaatatgtagatactttaggagatctatcatttaaggaagaagatttcttg
aacttactacaaacaggatttgaaggggctacttatcgtcaagttccatcaacacttgat
caagttattatttctgaaacaactgcgacacaaatgaatgatagaaaagtaacatttatc
tttggtgctacggacttagtaatgcctaatcgcattcaaaatacaatgttactgacagat
atggatagagaattagttcaaggaacactagatgatgagaaatatttatctgacactgcc
gaagaacgaatggcagcagaaccatttatgaactatttagcatttatgacacctagggaa
agattgtacttctcttatccagttgctggagttaatgaagatggattaagaatgtctcca
tacgtaaatcgcatcatgaaacaatttgatttaccactgtatgaagctaatggtgaacca
gcattagaagataaaaaagtcttgaaatttgtggcaactaaacggacggctttgagcaat
ttaattggagtagctcgtcaagctaaagggcaaaagcaacctttacctgtaatgtggaga
tatatctatcagaagttacaagaggatgttacttatcgcagacttacgcgtaaattgatg
gcagggatcgaatatagtaacattcctgaaagattaaagatagaatacgcagaaaaatta
tatggtaagacgttgaatacctctgtatctaaatttgaggaattcttcaaaaatcactat
gcctttttcttaaagtatggattgaaattaaaagaacgtgacgtgtttgaattatcacca
gctaatacaggtgaattctatcatatggccttagataaactattgaagactcttaaacaa
gataaagtctcaattgctgatataaataagcctcagtttgactcatatcttcaacaagtt
ctaggtggcatggaacaattaccacaatttcaaattttacaaagttcaaacagaatgcaa
tttatcttgaaacaacttggaaatactgtaagtcagatggggtgggctttacataaccaa
ggccaaagaacaaaaatgcgtcctttagaaacagaagtattgtttggacacgtaggaaca
gaaaatggtttgaaagctttgacttatgacttaggtaatggtcataaagttaatgtacgt
ggaaagattgatcgaatcgatcaaatgattatagacaatcaacgttatttaggaattgtt
gactataaatcaagtagtcataaatttaattaccaagatgcctactatggattggctttg
cagatgttgacatatttaaatgccatgttacaaaatacagacttattgcttgatttaaat
actggagaagagattaaaccagctggagcagtttatatgcacttgcaaaatcctgttatc
aagcaaaaggatattttgaaaaatccatatagcgaagtattgttgaaacaaaataaatac
gatggcttagttttagatgatcaagaattattaagtaatttagatacatcaattgaaaaa
tctggtaattctatcgtatatcctgttagaaaatatgcagacggtcattttggaggggtt
aagaatagcggtaatgtaatcacttttgataatttaatgttacttctaaaacgaaacgaa
gaattaattcaagaagccgcaaaacttatttttgctggtgatgtagcattaaatccagtt
ctatggccagatagacgctcagcattgcaatactcaccatataaggcgattatgcaattt
gatgaacttttagggaatcaatattatcgtttaccaaaggaaaataccgcagatattctc
cagaaattagcacaagaaaatacagcagaaagtgaggtttaa
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