KEGG   Ligilactobacillus salivarius JCM1046: LSJ_3155c
Entry
LSJ_3155c         CDS       T03340                                 
Name
(GenBank) Putative DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
lsj  Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:lsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsj03032]
    LSJ_3155c
   03036 Chromosome and associated proteins [BR:lsj03036]
    LSJ_3155c
   03400 DNA repair and recombination proteins [BR:lsj03400]
    LSJ_3155c
DNA replication proteins [BR:lsj03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LSJ_3155c
Chromosome and associated proteins [BR:lsj03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LSJ_3155c
DNA repair and recombination proteins [BR:lsj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LSJ_3155c
SSDB
Motif
Pfam: Bac_DNA_binding DUF2496 HU-HIG
Other DBs
NCBI-ProteinID: AIR11771
UniProt: A0A089QLH7
LinkDB
Position
pMP1046B:complement(123843..124121)
AA seq 92 aa
MVVETLNKADFVSKIAADNQITKKVAAEALEIVISGVKDVLAENKTLRLTGFATFETVYQ
EEHERKLGFTGETVTVPAGYRHKVKLAEKLKK
NT seq 279 nt   +upstreamnt  +downstreamnt
atggtagtagaaacattaaacaaagcagattttgtatcaaaaatcgcagcagataaccaa
attacaaagaaagttgcagcagaagcattagaaatcgttatttctggtgttaaagatgtt
ttagcagaaaacaagacattacgcttaacaggttttgcaacttttgaaacagtataccaa
gaagaacatgaacgtaagttaggcttcacaggtgaaactgttacagtaccagctggttat
cgtcataaagttaagttagctgaaaagttgaagaaataa

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