Leptothermofonsia sichuanensis: J5X98_00155
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Entry
J5X98_00155 CDS
T07904
Name
(GenBank) PD40 domain-containing protein
Organism
lsk
Leptothermofonsia sichuanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_Nup120_160
WD_LRWD1
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
NB-ARC
PD40
Ge1_WD40
PROPPIN
NACHT
Nbas_N
Beta-prop_VPS8
Cytochrom_D1
Beta-prop_WDR75_2nd
VPS8_N
ATPase_2
AAA_16
nSTAND3
AAA
Pentapeptide_4
AAA_22
NPHP3_N
TniB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QZZ20969
LinkDB
All DBs
Position
30401..34198
Genome browser
AA seq
1265 aa
AA seq
DB search
MTVEKGLELIEQILPQGQLSKVQEIVFRQAWEGQSYKEIADQSGYTLGYIKDTGADLWKL
LSKALGEDVTRRNFQVVLKRALREGSRESGVRSRENHCAPPQQDWGTAIDVSIFYNRTLE
LATLQQWVEQDRCRTVTILGMGGMGKTTLSVKLAEQVQDGFEYLIWRSLRHAPALSELLA
DVMLVLSNQQEVKLPETTDGQISELIKYLRQSRCLLVLDNLESVLQSGQQTGRYRPGYEE
YGQLLARVSDERHQSCLILTSREKPGEILIREGETLPVRSLQLAGLQAAAGEKILHEKGL
TESETACGQLIDHYSGNPLALKIAAATIRSLFGGNIAAFLNQGTVVFGDISELLDQQFNR
LSDLEQQVMYWLAIAREWITLEELQVEMIPTVSQSELLETLVSLQGRSLIESSGTGFSQQ
PVVMEYMTQQLVKQFYYAISAQELGFLNQYALIQAQTKDYVREAQIRLILQPVRDKLLAA
FETRQNLETQCNGLITQLRNQSGYSVYKEGYAAGNLLNLFWQLQGDLSENGERLFHNRDF
SHLTIRQAYLPLVTLHQTNFTGCKMQQSVFAETFGGVASVAFSPDGKRLATSDTSGDIQI
WELPGGSQLVSCKGHDHWVWAVAFSPDGQLLASASDDYRVKLWDVKTGTCLKTFIGHTYS
INAIAFSPDGRYIATGSQDATIRIWDLQTPARSSDVDASSHAGVVDTCVQLLGHQGRVWS
VAFRPVGTGEPSGAGPILASGSEDRTIKLWDMETGSCLQTLTGHSEWVKSVAFSPNRQVL
ASGSFDHTLKLWDWQTGNCLKTLRGHTSTVTMVAFSPNGEQVVSSSYDQTLKLWHVSSGQ
CLRTLQGHRNRIWSVAFDPTGEWLASGGDDHATKLWRVGSGQCTKTIKGHTNAVMAIALH
ADGHYLASGHEDQTVRLWDLAAGKCIQTLHGHTNRVWSVAFAPPSKTSPRNRVSDEDRQE
NQAMAQQQPDFCTNLLASGSGDRTIKLWNWRTGQCLKTLGGHSSWVWSVAFSPNGAWLAS
SSYDRTIKLWDVDTGKCVQTLEGHTAPAVSVAFSPDGRWLASSSFDTTIKLWQAETGQCL
QTFRGHQNSVWKIAFSPDGQQLVSCSFDLTLKLWDVPTGECLRTFEGHTAPIATVIYSPD
GKQLISGGFDQTIRLWNITTGQCIQILKGHTGLISSLAGQSAYRPAVNVSQISECFPDAL
SHQVTSTLFSGSFDETIRGWKLETRSCQSTLRVFRPYEGMNISRIEGLNDAQRMTLVALG
AIDDT
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttgaaaaagggctggagctaattgagcagattttgccgcagggtcagttgagc
aaagtacaggagattgtgtttcgacaggcgtgggaggggcagtcctacaaggaaattgcc
gaccagtctggttacactctgggttacatcaaagacacgggtgctgacctctggaaactg
ctgtctaaggcgctaggagaggatgtgacacggcgtaactttcaggttgtgctgaagcgg
gcgctgagggaggggagtcgggagtcaggagtcagaagtcgggaaaatcattgcgcccca
ccccagcaagactggggaactgcgatcgatgtttccattttttacaaccgcaccctggaa
ctggcgactttgcagcaatgggtagagcaggatcgatgccgcacggtgacaattctgggc
atggggggaatgggcaaaaccaccctctcggtgaagctggcggagcaggttcaggatggg
tttgaatacctgatctggcggagtttgcgccatgcgcctgctttatcggagctactggca
gatgtgatgctggtgctgtcgaatcagcaggaagtgaagctaccggagacaacagatggt
caaatttctgaattaatcaaatacttgcgtcaatctcgatgtctactggttttagacaac
ctggaatcggttttgcaaagtggtcagcagacggggcgctaccgtccgggctatgaggag
tacggtcaactgcttgcccgtgtcagtgatgagcggcatcaaagttgtttgatcctgacc
agtcgggaaaagccaggagaaattctgatccgggaaggggagacactgcctgtgcgatcg
ctccaattagctggactacaagccgccgctggtgagaaaatcctgcacgaaaaaggactg
accgaatccgaaactgcctgtgggcaactgattgatcattacagtggcaatcctctggcg
ttgaagattgccgcggcaacgattcgatcgctgtttggtggcaacatcgccgccttcctg
aaccagggaacggtagtgtttggcgatatttctgaactgcttgatcaacaattcaatcgt
ctttcagatctggagcaacaggtgatgtattggctggcgatcgcccgtgagtggatcacc
ctggaggagttacaggtagagatgatccccaccgtttcccaatcggaattgttggaaaca
ctggtatcgttgcaagggcgttctttgattgagtcgagtggaactggcttttctcaacag
ccagttgtgatggaatatatgactcagcagttggttaagcagttttactatgccatttca
gcccaggaattgggattcctgaaccagtatgccttgattcaagcccaaacaaaagactac
gttcgggaagcccaaattcgattgattttgcaacccgttcgagacaagcttctggcagcc
tttgaaaccaggcaaaacctggaaactcaatgcaatgggttgatcacccagcttcgcaat
caatctggatattctgtctataaagagggatatgcagcgggtaatttgttgaatttgttc
tggcaattgcagggtgatttgagtgagaatggggagcgtctatttcacaatcgtgacttt
tcccatctgaccatccgtcaggcatatctgccccttgtcaccctgcaccagactaacttt
actggttgcaagatgcagcaatcggtgtttgccgaaacctttgggggagtcgcttcggtt
gcgtttagtccggatggaaagcggctggcaaccagtgacaccagtggtgacattcaaatt
tgggaactgccaggtggcagccaactggtgagttgcaaaggacatgaccactgggtctgg
gcggttgcattcagccccgacggacaattgcttgccagtgccagcgatgattaccgggtc
aagctgtgggatgtcaagaccggaacctgtttgaagacgttcatcgggcatacctattcc
atcaacgcaatcgccttcagtcctgacggtcgctacattgctaccggctcccaggatgcc
accatccggatctgggatcttcagactcccgccaggtcatcagacgtggatgcgtccagt
catgcaggcgtagttgatacctgtgttcaactgttgggacaccaggggcgtgtctggtcg
gttgcgttccgtccggtggggactggtgaaccgtcaggcgctggtcccatcctggcgagt
ggctcggaagatcgcaccatcaaactgtgggatatggagacgggaagttgcctgcaaacg
ctgactggacattcagagtgggtaaagtcggttgcattcagccccaatagacaggtgctt
gccagcggcagttttgatcacaccctcaaactgtgggattggcaaacaggcaactgtctc
aaaaccctacggggacacaccagtactgtcacaatggttgcttttagcccaaacggagaa
caggttgtcagcagtagctatgaccagacgctaaagctctggcatgtcagcagcgggcaa
tgccttagaaccctccagggacataggaaccggatctggtcggtggcatttgatccaacg
ggtgaatggcttgccagtggtggagatgaccacgcgactaaattatggcgtgtcggcagc
gggcaatgcaccaaaacgattaaggggcataccaacgcagtgatggcgatcgccctccat
gcagatgggcattatctagccagtggtcacgaagaccagacggtacgcctgtgggatctg
gctgcggggaaatgcatccaaacattgcacgggcacaccaatcgagtctggtcggtggcg
tttgcaccaccctccaaaaccagtccgagaaaccgggtttctgacgaggataggcaagaa
aaccaggctatggcacagcagcaacccgatttctgtaccaatctgctggcgagtgggagc
ggcgatcgcaccatcaaactctggaactggcgcactggacaatgcttgaaaaccctgggc
gggcacagtagttgggtctggtcagtggcgtttagcccgaatggagcctggcttgccagc
agcagttacgatcgcaccatcaagctgtgggacgtggatacaggcaaatgtgtgcagacc
ttagaggggcatacagcaccagctgtttcggtagccttcagtcccgatggcaggtggctt
gccagcagcagctttgataccacaattaagctgtggcaggctgaaaccgggcaatgcctg
caaaccttcagaggacaccagaatagcgtctggaagattgccttcagtcccgatgggcaa
caactggttagttgcagttttgacctcacccttaaactctgggatgtgccgacaggtgaa
tgcctccgaacatttgagggacacacggcacccattgcaacagtcatctatagcccggat
ggaaaacaactaatcagcggtggattcgatcaaacgattcgactctggaacattacgaca
ggccagtgcattcagatattaaagggacacaccggcctgatttcaagcctggcaggtcaa
tctgcatatcgtccggctgtcaatgtcagccagatcagtgaatgttttccagatgccctt
tcgcatcaggtcacatcaaccctctttagtggcagttttgacgagacaatcaggggttgg
aagcttgaaacgcgatcgtgccagtcaaccttaagagtttttcgcccttatgaaggaatg
aacattagccgcattgaaggactcaatgacgctcaaagaatgacgctggtagctttagga
gccattgatgatacctga
DBGET
integrated database retrieval system