Leptothermofonsia sichuanensis: J5X98_00375
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Entry
J5X98_00375 CDS
T07904
Name
(GenBank) RNA helicase
Organism
lsk
Leptothermofonsia sichuanensis
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Paralog
GFIT
Motif
Pfam:
Ski2_cyano_M
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
nSTAND3
ATPase_2
nSTAND_NTPase5
UPF0242
Motif
Other DBs
NCBI-ProteinID:
QZZ21008
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Position
86317..89013
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AA seq
898 aa
AA seq
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MDNSGVNSPITSGLDLEKLFPFQLDDFQLQAIAALEAGRSVVVCAPTGSGKTLIGEYAIH
RALARKRRVFYTTPLKALSNQKLRDFRELFGTEMVGLLTGDVSINRDAPILVMTTEIFRN
MLYGTPIGEVGTSLIGVEVVVLDECHYMNDRQRGTVWEESIIYCPPEIQLLALSATVANS
DQLTDWIKQVHGPTELVYSDYRPVPLQFYYCNPKGMFPLLDSSQKRMNPQLKPKGGRGAV
RGGNRRGPRQESPNLAAVVSQLRQDDMLPAIYFIFSRKGCDQAMAEMAKLPLSLVNQEEA
ARLRQQVDEFLARSPEVGRAEQIEPLYRGIAAHHAGILPAWKGLIEELFQQGLIKVVFAT
ETLAAGINMPARTTVISSLSKRTDMGHRLLTASEFLQMAGRAGRRGMDIMGHVVTVQTPF
EGAREAAYLATVGADPLISQFTPSYGMVLNLLQTHTLEEARELIERSFGQYLATLYLRPQ
QQAIATLKAELAQLESQLESVDWDLLAQYEKLQERLKEEKRLLKYLQDQAAEVHSRDLPI
ALSFAVAGTALSLKGKHVPVAHPLSAVLVSKVPGSGQFPYLVCLGQDNRWYVVTVSDVVS
LRGEFPRLAAVDSLHPPTEMPLKPGQSRSGDEQTRAIAQRIPAIPSPLEEASEVVDQLQR
LSMVQAQIEMHPVHQWGNRTTILKRQKRVAAIQEEIRDREEKLGRQSQRHWEEFLSLIDI
LQQFGCLEELTPTITGQATAAIRGDNELWLGLSLMSGELDDLDPHHLAAACAALVTEVSR
PDIWTRYHLSAEVENALAGLRGIRRRLFQLQRKHNVVLPVWLEYELVGLVEQWAMGVDWL
ELCSNTSLDEGDVVRILRRTLDFLSQIPHVPHVSIELKTHAREAIGLLDRFPVNEGVE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
ttggataattcgggcgtgaattcccctataacatcaggattggacctggaaaagctgttc
ccgtttcagttagatgactttcagttgcaggcaatcgcggcactggaagcagggcgatcg
gtggtagtgtgtgcgccgacaggttcaggcaagacgctgattggggagtatgccatccat
cgggcactggcaagaaagcggcgagttttctacacgactcccctgaaggccctctctaac
cagaaattacgggattttcgggaactatttggaacagagatggtggggttgttaaccggg
gatgtgtccatcaaccgggatgctcccattctggtgatgacgaccgaaatcttccgcaac
atgctctatgggactcccatcggtgaagtaggtacctcattgataggagtagaagtggtt
gtcctggacgaatgccattacatgaacgatcgccagcgcggtaccgtctgggaagaatcc
atcatttactgtccgcccgaaattcaactacttgccctgtctgccacggttgccaacagt
gaccagttgaccgattggatcaagcaggttcacggtccaaccgaactggtttactctgac
taccgccccgttccccttcagttttactactgtaaccccaaaggtatgtttcccctgctg
gacagcagccagaagcggatgaacccccaactcaagcccaaagggggcagaggggcagtc
aggggtggcaatcgacgcggaccccggcaggaaagccccaatctggcagcagtggtgagt
caactgcgtcaggatgacatgctgcctgcaatttacttcatctttagccgcaaagggtgt
gaccaggcaatggcagagatggctaaactgccgctgtcgctggtgaatcaggaggaagcg
gcacgactgaggcaacaggtggatgaatttctggcacgcagcccggaagtgggacgggca
gagcagattgaacccctctaccggggcattgccgcccaccatgctggcattctgcccgcc
tggaaggggttaattgaagaacttttccagcaggggttaatcaaggttgtgtttgccacc
gaaaccctggcagccgggattaacatgcccgcccgcaccacggtgatttccagcctgtcc
aagcgaaccgatatgggacatcggctgctgaccgcttctgagttcttgcagatggcagga
cgggcagggcgacgcgggatggacatcatggggcatgtagtgacggtgcaaaccccgttt
gagggggcacgggaagcggcttacctggcaacagtgggagcggatcccctgatcagtcaa
tttacgcccagctacggtatggtgcttaacctgttgcaaacccacaccctggaagaagcc
agagagttgattgagcgtagttttggacagtaccttgcaaccctgtatctgcgcccccag
caacaggcgatcgccaccctgaaagctgaacttgcccaactggaatctcaactggaatcg
gtagactgggatttgctggcacagtatgaaaaactccaggagcgactgaaggaagaaaaa
cgactgctgaagtatttgcaagaccaggcagccgaagttcatagccgtgatctgccgatc
gccctttcctttgcggttgccggaacggctctcagccttaagggcaagcacgttccagtt
gcccatcctctttcagcggtactggtttcaaaagtgccgggttcaggtcagtttccctac
ctggtgtgcctgggacaggataatcgctggtacgtggtcacagtcagcgatgtggtcagc
ctgcgaggcgagttcccccgcctggcggctgtcgattcccttcacccacccactgaaatg
ccgctcaagccaggacaatcccgcagtggggatgaacagacgcgggcgatcgcccagcgc
attccagcgatcccctcccccctggaagaagcctccgaagtggttgaccagttgcaacgg
ttgtcaatggtccaggcgcagattgaaatgcacccggtgcaccagtggggcaaccgcacc
accatcttgaagcggcagaagcgggtagcggcaatccaggaggaaattcgcgatcgggaa
gaaaagctgggtcgccaatcccaacgccactgggaagaattcctgagtctaatcgatatc
ctgcaacagtttggttgcctggaggaactgaccccgaccatcaccgggcaggcaaccgct
gccattcggggagacaatgaactctggttagggctgtcccttatgtctggcgaactggat
gatctggaccctcaccacctggcggctgcctgcgctgcgctggtcacggaagtttcccgc
cctgatatctggactcgttatcacctgtctgccgaagtggaaaacgccctggcaggctta
cgcggcatccgtcgccgcctgttccagcttcaacgcaagcataatgtagttctgcctgta
tggctggaatatgaactggtgggcctggtggaacagtgggcaatgggggttgactggctg
gaactctgctccaacaccagcctggatgaaggggatgtggtccgtatcctgcgccgcacc
ctcgacttcctttcccagattccccatgtcccccacgtctcaatcgaattaaaaacccat
gcccgcgaagccattgggctgctggatcggttcccggtgaatgagggagttgagtaa
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