Leptothermofonsia sichuanensis: J5X98_03815
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Entry
J5X98_03815 CDS
T07904
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
lsk
Leptothermofonsia sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J5X98_03815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsk03021
]
J5X98_03815
Transcription machinery [BR:
lsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J5X98_03815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
DUF2316
DUF3896
Motif
Other DBs
NCBI-ProteinID:
QZZ21597
LinkDB
All DBs
Position
complement(889055..890059)
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AA seq
334 aa
AA seq
DB search
MSANVPSDPIEPDVIESDPIADIDFAIDLTEIEEMEAVESARDKSSYKPTKAERLGLTDD
SVGLFLREMARYPLLTQAQEIELAREIAKGGPGAEQAKRRLVRANLRLVVSIAKKYLNRG
VPFLDLIQEGAMGLMRAAEKFDYERGYKFSTYAYWWIRQGITRAIASQSRTVRLPVHMVE
KLNQIRKARQVLSQELGRKPTKQELAAALELDEDKLEQVLDVSQGTLSLHAWVGREEDTE
LMQLIEDSDNVAPNEHLDHKLLCDRLNSVLDHLSDRERDIIKLRFGLTDGQHYTLTEIGE
LYHLSRERVRQIQAKAMRKLRHPRRQALLKDWIR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaacgtaccttctgatccgatcgagccagatgttattgaatcggatcctatt
gctgatatcgacttcgcgatcgatttaaccgaaattgaggagatggaggcggtcgagtca
gccagagacaagtcttcctacaaaccaaccaaagcagaaaggttggggctgacggacgat
tctgtcggtctatttttgcgagaaatggcacgttacccactgctgacccaggcccaggaa
attgaattagctcgggaaattgcaaagggaggtcctggcgcagaacaagcaaagcggagg
ttggtcagggcaaatcttagactggtcgtttcaattgccaaaaagtatctgaatcgcggg
gtaccttttctggatttaattcaggaaggagcaatggggttgatgcgcgcggctgagaaa
tttgactatgagcgcggctataaattttcaacctatgcctactggtggattcgtcagggc
atcacccgggcgatcgcgtcccagtcccggactgtgcgtctacccgtccacatggttgaa
aaactcaatcagatccgcaaagcccgccaggtattatcgcaggaattgggacgaaaaccg
accaaacaggaactggcagcggctctggaactggacgaagacaagttggaacaggttttg
gatgtgagtcagggaacgctttccctccacgcctgggtcgggcgggaagaagataccgaa
ctgatgcagttgattgaagactcggataacgttgcacccaacgaacacctagatcacaag
ctgctctgcgatcgcctcaactcagttctggatcacctgagcgatcgcgaacgcgacatc
attaagcttcggtttggactgacggatggacaacactatactctgactgaaattggtgaa
ctttaccatctctccagggagcgtgtccggcagattcaggcaaaagccatgcgcaagctt
cgccatccccggcgtcaggcattgctaaaggattggattcgctaa
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