Leptothermofonsia sichuanensis: J5X98_05910
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Entry
J5X98_05910 CDS
T07904
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk03410
Base excision repair
lsk03430
Mismatch repair
lsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5X98_05910
03430 Mismatch repair
J5X98_05910
03440 Homologous recombination
J5X98_05910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsk03400
]
J5X98_05910
DNA repair and recombination proteins [BR:
lsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J5X98_05910
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J5X98_05910
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J5X98_05910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QZZ21953
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All DBs
Position
1348690..1351305
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AA seq
871 aa
AA seq
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MPDRTLHWQIHSTASPPPWFTDAIRQQMPDIDGRYIAQLLWQREMRDPAQLAGFLDAQFY
HPTSPFAFGQEMEWAVDRLSQAYHSQEPIAIWGDFDADGVTATGVLWDGLGQFFTQQKTL
FYYIPNRLTESHGLSRQGMDWLYAKGCRLIVTCDTGSTSLEEIEYARHLAMDVIVTDHHT
LPPERPPVTAMINPRYLPGDHPLATLSGVAVAYKLVEALYERLPQVPQKPLEHLLDLVAI
GLIADLVELKGDCRYLAQRGIEQLQKQSNPATVTRPGVAKLLEFCKRSGDRPTDISFGLG
PRINAVSRIHGDAHFCVELLTSEDTQLCTHLAEATELANTRRKALQKEVTEQVTRRLAQL
DLSTTGVIVLADEQWQVGILGLVAGQIAQEYGRPTILLSTEGMGGIEEGGERGEGRGERG
EEEALPVRIQRLKSRVPLARGSARSVNNIDLYQLVKDQAHLLTTFGGHPYAAGLSLPVEN
LPLFTEGINQTLRQSVDPTDAIRRIQADLTVTVAELGKELFQELKLLEPCGMGNPVPRLL
IQNCWFDRVWNKKIQDWKGQQVQYIKTEFELWDESATQGFAGVWWGHYRDELPAGRCDVI
VELDSNNYKKRYEVRLVAVRPCADQIEAMADTAWIMDLRQAVPGEEQESEKGAAEPSYEL
NAFNASTLQVLRKISNVSQKLEWQRVDQPVSPLFLHQCPSSWSEFQVWLRRSRQEQRPLA
IAYPSPSDRDPQEIWHQLVGVAKYLSRTGKTVTRQQVLDRLGIGDRALEMGFQTLGYLGF
SFSDEENALRVTWQSPLDPKAQSNQGIEPPFMAAVQQFIAVVKEEQFRRRYFYQVPLATI
QAVAAQLDLPEARDAAGNRDRSSQLTGMPDG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcgcacgcttcactggcaaattcactcaaccgcctcacctcccccgtggttc
actgacgccattcggcagcagatgccagacattgatgggcgttatattgctcaactgtta
tggcagcgcgagatgcgggatccagcccagttggcggggtttctggatgctcagttctac
catcccaccagcccttttgcgtttgggcaggagatggagtgggcagtcgatcgcctgagc
caggcgtatcacagtcaagaacccattgccatctggggagactttgacgccgatggcgtg
acagccacaggggtcctctgggatggcttggggcagttctttacccagcagaaaacactt
ttttactacattccaaatcgcctcacggagtcccacggactatcccggcagggaatggac
tggctgtatgcaaaaggctgccggttaatcgtgacctgtgacacgggcagtaccagcctg
gaagagattgagtacgcccgtcacttagccatggatgtgattgtgactgaccatcacacc
ctgccaccagagcgtccaccagttactgccatgatcaatccccgttacctgcctggggat
catcccctggcaacactgtcgggagtagctgtggcatacaaactggtagaggccctgtat
gaacggctgccacaggtgccgcaaaagcccctggagcatttgctggatctggtggcgatc
gggttaattgctgatctggtggagttgaaaggggattgccgctacctggcacaacgggga
attgagcaattgcaaaagcagtccaatccagcaaccgtaacccgtccaggggtggcgaag
ctgctggaattttgtaagcggagtggcgatcgccccaccgatatctcctttgggttgggt
ccccggattaatgccgtcagccgcatccacggcgatgcccatttctgtgttgaactgctg
accagcgaggatacccagctctgcactcacctggcagaagcaaccgaactggcaaacact
cgccgcaaagccctccaaaaagaagtcactgagcaggttacccgccggttagctcaactg
gatttgtccactaccggtgtgattgtgctggcagatgagcagtggcaggtgggcatcttg
gggctggttgccgggcagattgctcaggagtatgggcgtccgactattttgttgagtacg
gaagggatgggtggaatagaagaggggggagagaggggagaggggagaggagagagggga
gaggaggaggcgttgccggttcggattcaacggttgaaatcccgggtgccgcttgcgcgg
gggtctgcccggtcggtgaacaatattgacctgtatcaactggtaaaagaccaggcacat
ttgttgacaacgtttggcggacatccctatgcagccgggttgagccttccagttgaaaat
ctgcccctgttcacggagggaataaaccagaccttgcgccagtctgtcgatccaacagac
gctatccgacgaatacaggcagatctgaccgtgacggtggcagaactggggaaggaactg
tttcaggagttgaagctacttgaaccttgcggtatgggtaatccagttccccgactgctg
attcagaactgctggtttgaccgggtctggaataagaagattcaggactggaaagggcag
caggtacagtacatcaaaactgaatttgagctttgggacgagtcggctacccagggattt
gcgggggtctggtggggacactaccgggatgagctacctgctgggcgctgtgatgtgata
gtcgaactggacagcaataattacaagaagcgctacgaagtccgattggtggctgtgcgc
ccctgtgcggatcaaattgaagccatggctgatacagcctggattatggatttgcggcag
gcggtgccgggagaagagcaggaaagcgagaaaggagcggctgaaccgtcctatgaattg
aatgccttcaacgcatccacccttcaagtcctacgcaaaatcagcaacgtcagccagaaa
ttagagtggcagagggtagaccaaccagtttctccattgttcctgcatcagtgtcccagc
agttggagcgagtttcaggtctggctccgtcgatcgcgacaggaacagcgaccgctggcg
atcgcctatccgtccccatcagatagggatccccaggaaatctggcaccaactggtggga
gttgccaagtatctgagccgcaccggcaaaacggtgacccgacaacaggtattggatcga
ttgggaattggcgatcgcgccctggaaatgggctttcaaaccctggggtatctgggtttt
tccttcagtgacgaagagaatgcactgcgcgttacctggcagtcccccctggaccccaaa
gcccagagtaaccaggggatagagccaccattcatggcagccgtgcagcaattcattgcc
gtcgtcaaagaagaacaatttcgccgtcgttacttttaccaggtacccctggcaacgatt
caggcggtggccgcccaattagatttgccggaagcaagggatgctgctggaaacagagat
cgctccagccagctcactggaatgccggatgggtaa
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