Leptothermofonsia sichuanensis: J5X98_06950
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Entry
J5X98_06950 CDS
T07904
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lsk
Leptothermofonsia sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsk03016
]
J5X98_06950
Enzymes [BR:
lsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J5X98_06950
Transfer RNA biogenesis [BR:
lsk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J5X98_06950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QZZ22127
LinkDB
All DBs
Position
complement(1598614..1599243)
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AA seq
209 aa
AA seq
DB search
MASNNFQICDGDLSDEQLADYLKAEAIAVDTETMGLLPQRDRLCLVQLCDSQDHVTVVRI
ARGQTAAPNLKRLLEAEHILKVFHFARFDIATLRYHLDIYTNPLFCTKIASKLARTYSPK
HGLKDLIQELEQVELDKSAQSSDWGNAANLSPEQLRYAANDVRYLLSAQKRLTAMLERED
RWDLAQQCFKCLPTLALLDLMQYQGVFDH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaataatttccaaatttgtgacggtgacttatcagacgaacaactggctgac
tatttgaaggcagaggcgatcgcagtcgatactgaaaccatgggactgctgccccagcgc
gatcgcctctgcctcgtccaactctgtgattcccaggatcatgtaacggtagtccggatt
gcccgtgggcagacggcagcccccaatctcaaacggctgctggaagcggaacacatcctc
aaggtttttcactttgcccggtttgacattgccaccctgcgctatcacctggatatttat
accaatcctctattctgcacaaaaattgccagcaaactggcacgcacctattcgcccaag
catgggctgaaagatctgattcaggaactggagcaggtagagctggataaaagcgcccag
agttctgattggggaaatgctgccaatctctctccagagcaacttcgttatgcagccaac
gatgtacgttacctgctcagtgcccaaaagaggctcactgccatgctggagcgtgaagac
cgctgggatctggcacaacagtgtttcaagtgtcttccaaccctggcactactggacctg
atgcaataccagggggtgtttgatcactaa
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