Leptothermofonsia sichuanensis: J5X98_09115
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Entry
J5X98_09115 CDS
T07904
Name
(GenBank) GAF domain-containing protein
KO
K11525
methyl-accepting chemotaxis protein PixJ
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J5X98_09115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lsk02035
]
J5X98_09115
Bacterial motility proteins [BR:
lsk02035
]
Pilus system
Positive phototactic motility proteins
J5X98_09115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
MCPsignal
GAF_2
HAMP
GAF_3
Motif
Other DBs
NCBI-ProteinID:
QZZ22505
LinkDB
All DBs
Position
2092567..2096064
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AA seq
1165 aa
AA seq
DB search
MVNQTNAASDMSRFQPIQPVWNTPSSSSISTELTAQLPITPNPKQKVSVIQKFSDLPVGR
KQFIALLVCQLVPILGFSVGTILMLTSQSKTQLLDQATSEVAILEANYNLKVDQLGLSAR
GLANNSILINAAKAQIGSGELRPELQEQVREILRKEMQTHQLEYVTLVSKDLRIIGNANA
NRQGETFDPNGLVSAAMRNGQQIKASAIAPWSELMKESVSLPTGFTNRDALIRYVITPVT
DPNTQDVIGSLVVGILVNNTLAVLGGTTSSLGDGYSGVYFRQPNGQFGLATALNNTALDK
GNVTQESSRSNISISDPFLLKAAAAAPKGETVTGQVTIDGVPYTVAAKAAPNRIVETANG
AFPAYSRQPAAILVRGIPNERLYGLLRASLVQQGTALFVGLVMVLFCASVLRRTVTRPLQ
DLERATLAFARGDRTARAEVSFKDEVGRLATLFNYLTDRIADSEQALTLEAERQRHQIRE
AQLLSDVIVNIRRSIKIEDIMRTSVNEIRQFMGVERVLLYRFNDDYKSGTITAESVAPGW
VKALGQTIHDPLSEDALDRFNSGRVSFINNWEEAKLNNCYCEILERLQVKANMVVPIKSN
NKLFGLLCAHSCSSPREWKESELDFLGRLGAQIGYALDQADLLERQKEESRLSRLLNEIT
LSIRENFSKESILNTTVREMRRVLNADRVVVYQFNSDMTGTIIAEAISLGWLPLLGETVT
DPFREGLVDQYRNGRIRVMNDIYAEGLTECHRELLEGFQIRASITAPFLHGSRLMGLLCI
HQCSDPREWKEAEINFVQQLSNQLGFAIEQAILFEEKEKSRLQAETILQEQRQQQETLQR
QLVSLLGDVEGVAMGDLTVRADVTAGDIGTVADFFNSIVESLRQIVTQVKQSALHVNMAI
SEHESAIRELAKEALRQAQETTLTLDSVEQMTHSIRAVAENARQAAEVTRTASSTAEAGG
AAMDLTVQNILTLRDTIGETAKKVKRLGESSQQISKVVSLINQIALQTNLLAINAGIEAA
RAGEEGQGFAVVAEEVGELAARSAAATREIEQIVETIQRETSEVVEAMEQGTTQVVEGTY
LVGNARQSLEQIMMVSRQIDSLVQSISEATVSQVQTSQTISSLMEEVAQVAERTSNSSLQ
VSDSLRQTVAIARELQKSVETFKVG
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatcaaaccaacgctgcctctgatatgtctcggtttcagccaattcagccggtc
tggaatacaccatcttcctcttctatcagtactgagctaaccgctcaacttcccattacg
cccaatcccaaacagaaggtatcagtgattcaaaaattttccgatttaccggttggacgc
aaacaattcattgccctgttggtctgccaactggtacccattctgggcttcagcgtaggg
acgatcctgatgttgaccagccagtcaaaaacccagttgctcgaccaggcaacatcagaa
gttgccattttagaagctaactacaaccttaaagttgaccaactggggttgagtgctcgt
ggtttggcgaataattctattctgatcaatgccgcaaaagctcagattggttcaggtgag
ttgcgtcctgagttacaggaacaggtgcgggaaatcttgaggaaagagatgcaaactcat
cagttagagtacgtgactctggtgagcaaagatttacgaatcattggaaatgccaatgcc
aatcggcagggagaaacgtttgacccgaatgggttggtgagtgcggcgatgcggaatgga
cagcaaattaaagccagtgcgatcgctccctggagcgaactgatgaaagaatcagtgtca
cttcctactgggttcacgaaccgggatgcgctgattcgctatgtgatcaccccagttact
gatcccaacacacaagacgtcattggttcactggtggttggaattttggtgaacaatacc
ttagctgttttaggaggtacaacgagcagtctgggcgatggctacagtggagtttatttc
cgtcaaccgaatggacagtttgggttagcaacggcactaaacaatactgcactggacaaa
ggcaatgtcacccaggagtcatcccggagcaatatttccatttctgacccgtttttgttg
aaggcagcggctgccgcccccaaaggagaaacagtaactggacaggtcacaattgatggt
gtgccctacactgtggctgccaaagccgctcctaacaggattgttgaaacagccaatgga
gccttccctgcctatagccgacagcctgcggcaattctggtcaggggtattccgaatgag
cgcctgtatggtttacttcgcgccagtctggtgcaacagggaacagctcttttcgtggga
cttgttatggttctattctgtgcctcggttttgcgacggaccgtgactcgacccctccag
gatttggagcgggcaaccctggcatttgcccggggcgatcgcaccgccagagctgaagtc
tcatttaaagatgaagttggacgtctggcaaccttgtttaactatctgacagaccgtatc
gctgactcagaacaggcgctgactttggaagctgaacgccagcgtcatcagatacgggaa
gcccagttgttgagtgatgtgattgtcaatattcgacgatctatcaaaatcgaagatatc
atgcgcactagcgtcaacgaaattcgccaatttatgggtgttgagcgtgtattactctat
cgtttcaatgacgattacaaaagtggtactatcacggctgaatcagttgcccccggctgg
gtgaaagcacttgggcaaaccatccatgatcccctttctgaggatgcccttgatcggttt
aacagcggtagggtttcctttatcaacaactgggaagaagccaaattgaacaactgctac
tgtgaaattttggagcggcttcaggttaaagccaatatggttgttcccatcaagtccaac
aacaaactctttggtttgttgtgtgctcactcctgtagtagcccccgtgaatggaaagaa
tcagaactagattttttggggcgcctcggtgctcaaattggctacgcacttgaccaggca
gatttacttgaacgccagaaagaggagtccaggcttagtcgcctgttgaatgaaatcact
cttagcatccgtgaaaacttcagtaaagaaagtattctcaacaccactgtaagggaaatg
cgccgagtattaaatgcagaccgggtggttgtgtaccagttcaattctgatatgactggc
accatcattgcagaggcgatcagtctgggttggttacccctgcttggtgaaaccgtcacg
gatcccttccgtgaggggttagttgaccaatacagaaatggacggattcgagttatgaat
gatatttatgctgaaggtctgaccgagtgtcaccgcgaattgctggaaggctttcagatt
cgtgccagtatcactgctccatttctacatggcagccgattgatggggctgttgtgcatc
catcagtgttctgatccacgcgaatggaaagaagcagaaatcaactttgtccaacagcta
tccaatcagcttggtttcgctatagaacaggcgattctatttgaagaaaaagagaaatcg
cgtttgcaagcggaaacaattttgcaagaacagcgccagcagcaagaaacgttacagcgg
caattggtgtccttgctgggagatgtggaaggggtagcaatgggcgacctgaccgtccgg
gcagatgtgacggcgggagacattggcaccgttgccgacttttttaactcgattgtggaa
agcttgcggcaaattgtgactcaggttaaacaatctgctttgcatgtcaacatggcgatc
agtgaacatgaaagtgccattcgggaactggcaaaagaagcgctgagacaggctcaggag
acgaccctgacgctcgactccgttgagcaaatgacccattcaattcgggcagttgccgag
aatgcccgtcaggctgctgaagtaacgcgcactgcatccagcacggcggaagctgggggt
gcggccatggatctgactgtgcagaacattctgaccctgcgtgacacgattggcgaaacg
gcgaagaaggtgaaacgcctgggtgaatcatcccagcaaatttctaaagttgtctcgctg
atcaatcagattgccttacaaaccaatctcctggcaatcaacgctggaattgaagccgct
cgcgctggagaagaaggccagggatttgcagttgttgccgaagaagtcggtgaactggct
gcccgttctgccgctgccacccgcgaaattgagcaaattgtagaaaccattcaacgggaa
accagcgaggtggtggaagcgatggagcagggcacaacccaggtagtagaaggtacctat
ctggttggcaacgccaggcaaagtctggagcaaattatgatggtttctcgccagattgat
tctctggtacagtccatttcagaagccacggtgtcccaggtgcaaacgtctcaaaccatt
tcttccttaatggaggaagtggctcaggttgcagaacgaacttccaattcctctcttcag
gtgtctgattccctacgccagactgtagcgatcgccagggaacttcagaagtctgttgag
acgtttaaggttggatag
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