Leptothermofonsia sichuanensis: J5X98_10310
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Entry
J5X98_10310 CDS
T07904
Name
(GenBank) PAS domain S-box protein
Organism
lsk
Leptothermofonsia sichuanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
PAS
PAS_3
PAS_8
HATPase_c
HisKA
Response_reg
GAF
PAS_7
GAF_2
PAS_11
GAF_3
HATPase_c_3
PAS_6
Motif
Other DBs
NCBI-ProteinID:
QZZ22710
LinkDB
All DBs
Position
2393900..2398702
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AA seq
1600 aa
AA seq
DB search
MDTASIDPAPRSTPDLSNSLLSLLKATLESTVDGILVVTRDRNTPVYNQKFLQMWGLSES
LMQPSMADERLKALSEQTKDPEGFIARIWELFRDRPTETVLDTLEFKDGRIFERYSQPLW
NGDQVIGRVWSFRDVAERRRNEQALQQQATAIKASIDGIAILDANETYVYLNDSYARIYG
YDTVQELIGKSWKVLYTEAEQQRLEREAFPVFQQSGHWQGEAIGRRRDGSAFPQEISFSA
TQTGGLVCIVRDITQRKQVEAERQRAEAALRESEERLRLTLDFSRIGIWSWDLVTGTLTA
SEEAIRLVGLEPGIEVSYPLWRNLVHPEDIDRVEQALTRSLEDHTDYDAEYRIIYPDRSI
HWIVARGRCVYDQTEQPLRMLGVLIDITDRKQAEEALRQSESRFRLLYEATGLAVLLLDE
NGFFDCNQAAADLLGYPRQEIVGKYPSDLSPPYQMDGQDSISLASQLIQLTLEQGSSQFE
WIHQRPDGTQFPVEVWLTTITVGDRPFIQAIIQDLTERKQVEAALAEQASLEAFRADVDS
ALAQSDTLPIMLQRCTAAVVVHLNAAFARIWILNPEENVLELKASAGMYTRLDGTYSRIP
VGSPKIGRIAQDHQPIITNQIQNESQTFDPDWVSQEGFVGFASYPLMLGDQFQGVIAMFS
RKPITDSIAEALGFAASEIALGICRKRAEAALRESELKFRTIVENANDIIYVHDSEGKFT
YVSPNVTSILGYTPAEVEQHSFMAIAHPDDIEQCHQVLQRVVTQGEKQQNLELRIRHRDG
SWRWFSCNESPIQDADGQVMVMGVARYSSVRKQLEAELRQSQQFLDSIINNIPLALFTKD
IQNDFRYVLINQNSDQILGFPRAGAIGKNDYDLLSKELADAYRAQDQTAVDQGTLLEIPD
YPIQTPEGTILARSMKLPLFDSQGNPTYLLCISEDITERKRQEEALQLIVEGTAAKTGDD
FFRTCVRYLAEVLQVHCAFVTEWANEQHTRVRLLAMWLGGAFSNNFEFDLCGTPCENVVK
GQNLYFYPEDVPILFPNDPYIPLLQAESYLGIPLRDTAGKMLGYLAVTDNKPMKPDPGRE
LILKVFAARAGAELERKQSETALMVAKEAAEAANRAKSTFLANMSHELRTPLNAILGFTQ
LMVRDPTLAVQQRRFLETINRSGEHLLMLINDVLEMSKIEAGRTVLNPDSFDLHLLLHTV
YEMFQERAERKHLVLEFDRSADLPQHVIADEGKLRQILINLLSNGIKFTQAGRVSLSASV
LSRQGNIEAVQGESASNHWVLYFEVEDTGIGISPNELENLFQPFVQTSSGNQSREGTGLG
LAISRQFVQLMGGSIGVTSTLGQGSVFSFDVPVLLADPASVPAPAVSRQVVGLAPNQPTY
RILVVDDRPENRDLVTQLLLNVGFAVRTASNGQEAIAQWQAWHPHLIWMDMRMPVMDGYE
ATRRIRDIESRVLLCVRDATKIIALTASAFDEQQSIMLAAGCDDLVIKPFREAVIFEKMA
THLGVQYIYAEEPQTDTETGSPVESPIPVPPFTLSPDAFHAMPLEWVNQLQQAALAVDGD
QIRHLIAQIPESDRPLAEALTHLVQQYQFDEILELTQGMD
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcatccattgatccagcccctcgttcaacccctgatttgagcaattctctt
ctctcgcttctgaaggcaaccctggagtcaactgtggatggcattctggtggtgacccgc
gatcgcaatacccctgtctacaatcagaagtttttgcaaatgtgggggttatccgagtcc
ctgatgcaacccagcatggcggatgaacggctgaaggccctgagcgaacagaccaaagac
ccggagggattcatcgccaggatctgggaactgtttcgcgatcgccccacagaaacagtc
ctggatacactggagttcaaagacgggcggatttttgaacgctattcccaacccctgtgg
aatggcgatcaggtgattggccgggtgtggagcttccgtgacgtggcagagcgccggcgc
aacgagcaggcattgcaacagcaggcaacggccatcaaagcctcgattgacggtatcgcg
attctggatgccaatgaaacctatgtttatctgaacgactcctatgcccgcatctatggt
tacgacaccgtccaggaattgattggcaaaagctggaaagttttatataccgaagccgaa
cagcaacggttggaacgggaggcatttccggtctttcaacagagcgggcactggcaggga
gaggcgatcggcaggcgacgggatggcagtgcctttccccaggaaatctctttctccgcc
acccagactggaggactggtctgcatcgtgcgggatatcacccagcgcaaacaggtcgaa
gccgaacgccagcgggcagaagcggctctccgcgagagcgaagaacgattaaggttgacc
ctcgacttttcccggattggcatctggagttgggatctggtcacgggcaccctcactgcc
agtgaagaagcaatacggctggtaggactggaaccgggcatagaagtcagttatccactg
tggcgtaacctggtgcatccagaggatattgaccgggtagagcaggcactcacccgttcc
ctggaagaccataccgactatgacgccgaataccggatcatctaccctgatcgcagtatt
cactggattgtggccagagggcggtgtgtttatgaccagacagagcagcccctgcggatg
ctgggggtgctgattgacatcaccgatcgcaaacaggcagaggaggcactgcgtcaatca
gaatcccgcttccggcttctttacgaagccacaggtttagctgtgttgctactggatgaa
aatggcttttttgactgtaaccaggccgccgccgatctacttggctatccccggcaggag
attgtgggtaaatatcccagcgacctttcccccccctaccagatggatgggcaggactcc
atcagtcttgccagccaactgattcaactcaccctggaacagggcagtagccagtttgaa
tggatccatcagcgccccgatgggacccagttccctgtggaagtctggttaacaacgatc
acagtgggcgatcgccccttcattcaggcaatcattcaagacctgaccgagcgcaagcaa
gtggaggcggccctggcagagcaggcaagcctggaggcattccgggcggatgtggacagc
gccctggcccagagcgataccttgccaatcatgttacagcgctgcacggcggcggttgtg
gttcacctgaatgcagcctttgcccgcatctggatcttgaacccggaagaaaatgtgctg
gagttaaaagccagtgctggtatgtatacccggctggatggcacctacagccggattccg
gtaggtagccccaaaattggcagaattgcccaggatcatcagcccatcattaccaatcag
atccagaacgaatcccagacctttgatccagactgggtgagccaggagggatttgtcggt
ttcgccagctatcccctgatgttaggtgaccagttccagggggtgattgccatgttttct
cgcaaacccatcaccgactcgatcgctgaagccctggggtttgccgccagcgaaattgcc
ctggggatttgccgcaagcgggcagaagccgccctgcgggagagtgaactgaagttccgc
accattgtcgaaaacgccaacgatatcatctatgtccacgattcagagggcaagtttacc
tacgtttctcccaatgtaacctccattttgggatataccccggcggaggtagagcagcat
tcattcatggcgatcgctcaccccgatgatattgaacaatgtcatcaagttctgcaacgg
gtcgtaacccagggagaaaaacaacaaaatcttgaactgcgtatacgacatcgggatggt
agctggcgctggtttagttgcaacgaatctcccatacaggatgctgatgggcaggtcatg
gtcatgggggtggcgcggtatagcagcgttcgcaaacagttggaagcagaactgcgtcag
tcgcaacagttcctggacagcatcattaacaatattccactggccctgtttaccaaagac
atccagaatgatttccgctatgtcctgatcaaccagaactccgaccagattttggggttc
cccagggcgggggcgatcggcaaaaacgattatgatctgctatccaaagaactggcggat
gcctaccgggcacaggatcagacagccgttgaccagggtaccttactggaaatcccggac
tacccgattcagaccccggaaggcaccatcctggcccgatccatgaaactgcccctgttt
gacagccagggcaaccccacctacctgctctgcatttccgaagacatcacggaacgcaaa
cgccaggaagaagctctgcaactgattgtggaaggcaccgccgccaaaacaggggatgac
tttttccgcacctgcgtccgctacctggcagaggtattgcaggtccattgtgccttcgtc
actgaatgggcgaatgagcaacatacccgcgtgcgcctgctggcaatgtggctgggaggg
gcatttagcaacaactttgaatttgatctctgtggcaccccctgtgaaaacgtagtcaaa
ggtcaaaacctctacttctacccggaagacgtgcccatccttttccccaacgatccctat
attcccctcctgcaagccgagagttacctgggaattcctttgcgtgataccgctggcaaa
atgctgggctacctggccgtgacagacaacaaacccatgaagccggatccgggacgggaa
ctgattctgaaggtgtttgctgcccgtgctggggcagaactggaacgcaaacagtctgaa
actgcccttatggttgccaaggaagccgcggaggctgccaaccgggcaaagagtactttc
ctggcaaacatgagccatgaactgcggacacccctgaacgctatcctgggcttcacccaa
ttgatggtgcgagatccaactctggcagtccaacagcgtcgctttttagaaaccatcaac
cgcagtggtgaacacctgttgatgctgatcaacgatgttctggaaatgtccaaaattgaa
gctggacgaacggtgctcaacccggactcctttgacttgcacctgttgctccatacagtc
tatgaaatgttccaggagcgagcagagcgcaagcatctagtgctggagtttgatcggtct
gccgatttaccccagcatgtgatagcggatgaaggaaagttgcggcagatcctgattaac
ctgttgagcaatgggatcaagttcacccaggcgggcagggtttccctgtcagcatctgtc
ctcagccgtcagggaaacattgaggctgttcagggagagtctgccagtaaccattgggtt
ctgtactttgaagtagaagataccggcattggaatttcacccaacgaacttgaaaatctg
ttccagccctttgttcaaacatccagcggcaaccagtccagggaaggaacggggttaggg
ctggcaatcagtcggcagtttgttcagctcatgggtggcagtattggtgtcacaagtacc
ctgggacagggatcggtctttagttttgatgtcccggtcctgttagcagatccagcctct
gtgccggctcctgcggtttccaggcaggtggttgggcttgctcctaaccagccgacttat
cggattctggtggtagacgatcgccctgaaaaccgcgacctggtgacccaactgttactg
aacgtgggctttgcagtccgtactgccagtaatgggcaggaggcgatcgcccagtggcag
gcctggcatccgcacctgatctggatggacatgcgaatgcccgtgatggatggctatgaa
gccacccgacgcatccgcgatattgagtcccgcgttttgttgtgtgtcagggatgccacc
aagatcattgccctcaccgccagtgcctttgatgaacaacaatccatcatgcttgccgct
ggttgtgatgatctggtgattaaacctttccgggaagcggtgattttcgaaaagatggca
acccatttgggcgtgcaatatatctatgcagaggaacctcagacggacacggaaaccggg
tctcccgtggagtctcctattcctgtgcctccctttaccctcagcccagacgctttccat
gccatgccgctggagtgggtcaatcaattacaacaggccgccctggcagtggatggtgac
cagatccggcacctgatcgcccaaattccagagagcgatcgccccctggcagaagcgctt
acccatctggtgcagcaataccagttcgacgaaattctggaactcacgcaaggcatggat
taa
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