Leptothermofonsia sichuanensis: J5X98_12125
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Entry
J5X98_12125 CDS
T07904
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5X98_12125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsk03019
]
J5X98_12125
03009 Ribosome biogenesis [BR:
lsk03009
]
J5X98_12125
Enzymes [BR:
lsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
J5X98_12125
Messenger RNA biogenesis [BR:
lsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J5X98_12125
Ribosome biogenesis [BR:
lsk03009
]
Prokaryotic type
rRNA processing factors
J5X98_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
QZZ23019
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All DBs
Position
2861503..2863644
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AA seq
713 aa
AA seq
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MPKQIIIAEQHRIAAVFSEDQIQELIVATGSHQVSDIYLGIVENVLPGIDAAFVNIGDSE
RNGFIHVTDLGPLRKRRTAGSITELLEPQQKVLVQIMKEPTGNKGPRLTGNISLPGRYLV
LMPYGKGVNLSRRIRNENERNRLRALAILVKPAGMGIVVRTEAEGMPEDAIIEDLEALQR
QWENVLQEAMTTRAPALLNRDDDFIQKVLRDVYSADVNRIVVDSHTGLKRVKQHLMNWGG
GKMPPGVLIDHHRDRIPILEYFRVNPAIREALKPRVDLPSGGYIVIERTEALTVIDVNSG
SFTRSATARETVLWTNCEAATEIARQLRLRNIAGVIVVDFIDMDSRRDQLQVLEHFNKAL
RADKARPQIAQLSELGLVELTRKRQGKNIYEIFGRSCPTCGGIGHLVHLPGEPDSEEGEP
IERPAAAIREPRTIEARGRRGRDSGLPDIPGVSDLFWEDRSEDTDDGNDLQDIGLSHPNY
QEVGGNNRRRRRRRDDDRPPRTGYGAPVAKAEPGTDADPYAPAEESAFPVRNERGRGRGR
GRGRDGDRNETGGAPPEPSTLQEATEAGYGDERRSRRRDSNKPTEPPEFVSVEMTPEEQD
VYAWMGISPLTLATQEVKNPKSAIISIVLPGEAPPPVELETSAAVTTSGGSTVQAPVRRS
PIKPEEDGAISAPELSSPVEVSPVQVTSEPEPSEPEGAVVRRRRRRSSAAAGE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcaaattattatcgccgagcagcatagaatcgctgctgttttttccgaagat
cagatccaggaacttatcgtcgctacgggtagccatcaagtcagtgatatttatctcgga
attgtagaaaatgttttgcctggaattgatgcggcttttgtcaatattggagatagtgaa
cgaaacggctttatccatgtcactgatttaggtcccctgcgcaaacgccgcacggcaggg
tcgatcactgaactgctggaaccccaacagaaagtcctggttcagattatgaaggagcca
accgggaataagggtccccggttgacgggtaacatttccctcccagggcgctacctggtg
ctgatgccctacggcaaaggcgttaacctttcccgccggattcggaatgagaacgagcgc
aatcgcctgcgggcactggcaatcctggtaaaaccagccgggatgggaattgttgtccgc
acggaagcggagggaatgccagaggatgccatcattgaagacctggaagcccttcaacgc
cagtgggaaaacgtgttgcaggaggcaatgacgacccgtgctccagcattgctaaaccgg
gatgatgatttcatccagaaagtattaagagatgtttacagtgccgatgttaatcgaatt
gtggtggactcccacacggggttgaaacgggtcaaacagcacctgatgaactggggcggc
ggtaagatgccccccggtgttttgattgaccatcaccgcgatcgcatccccattctggaa
tacttccgggttaatccggcgattcgggaagcactaaagcccagggtggacctgccctct
gggggctacattgtgattgagcggacagaggctctgactgtcattgacgtaaactccggc
tccttcacccgttccgcgactgcccgtgaaacggtattgtggacgaactgtgaagctgcc
acggaaattgcccgccagttacgcctgcgcaatattgccggagtcattgtcgtagacttc
attgatatggactcccggcgggaccagttgcaggtattggaacactttaataaagccctg
cgggcagacaaagcccgtccccagattgctcaactatctgaactggggctggttgaactc
actcgtaaacgccagggtaagaacatttacgaaatttttgggcgttcctgtccgacttgt
ggtggcatcggacacctggtccacctgccaggcgaaccagacagtgaagaaggggaaccg
attgaacgtcctgctgctgccatacgggaaccccgcaccattgaagcacggggacgacgg
ggacgggatagcgggctgccggatattcccggcgtttctgacctgttctgggaagaccgt
agtgaagatacggacgacggcaatgacttgcaagacatcgggctgagccatcccaactac
caggaagtaggcgggaataatcgtcgtcgtcgccgtcgccgggatgatgatcgcccacct
cggactggctatggagcacccgttgcaaaagcagaaccagggaccgatgcagacccctat
gcaccggctgaagagtctgctttcccggtcagaaatgagcggggacggggacggggacgg
ggacggggacgggatggcgatcgcaatgaaactggaggagcgcctccggaaccgagcacc
ctgcaagaagcaaccgaagcaggctatggggacgagcggcggagtcgcagacgggactcg
aacaaacccactgagccgcctgaatttgtgtctgtggaaatgaccccagaagagcaggat
gtctatgcctggatgggtatttctcccctcaccctggcaacccaggaagtgaaaaatccc
aagtcagcaattatttccatcgtcctgcctggagaagccccgcccccggttgaattggaa
accagtgctgcggtcacgacctctggtggatcaactgtgcaggcacctgttcggcgatcg
cccatcaaaccagaagaggacggggcaatttctgcccctgagttatccagcccggtggaa
gtcagcccggtgcaagtcacctctgaacctgaaccatcagaacctgaaggtgccgtcgtc
cgtcgtcgtcgccgccgttcgtctgcggcagcgggtgaatag
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