Leptothermofonsia sichuanensis: J5X98_13980
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Entry
J5X98_13980 CDS
T07904
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lsk
Leptothermofonsia sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsk03032
]
J5X98_13980 (topA)
03400 DNA repair and recombination proteins [BR:
lsk03400
]
J5X98_13980 (topA)
Enzymes [BR:
lsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J5X98_13980 (topA)
DNA replication proteins [BR:
lsk03032
]
Prokaryotic type
DNA Topoisomerases
J5X98_13980 (topA)
DNA repair and recombination proteins [BR:
lsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J5X98_13980 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QZZ18601
LinkDB
All DBs
Position
complement(3272702..3275437)
Genome browser
AA seq
911 aa
AA seq
DB search
MPKLVIVESPTKARTIRNYLPNDYRVEASMGHVRDLPQSASEIPASVKGEKWAQLGVNVE
DNFEPLYVVPQDKKKIVKELKDALKAADELILATDEDREGESISWHLLQLLQPKVPIKRM
VFHEITEDAIREAIQNCRTVDERLVRAQETRRILDRLVGYTLSPLLWKKIAYGLSAGRVQ
SVAVRLLVNRERQRRAFRQGSYWDLKATLVATSQEPGVRSQEAFEAKLVTLGGIKVATGS
DFDETTGQIAQGRNVVLLNEAEARALADRIRDRTWTVISLEERPVTRKPSAPFTTSTLQQ
EANRKLGLSARDTMRVAQSLYEQGYITYMRTDSVHLSQQAIAAARACVQEMYGADYLSPE
PRQYTTKSKGAQEAHEAIRPAGNTFRTPQQTGLKDREFRLYDLIWKRTVATQMAEARQTH
ITVQIQVEDAGFRASGKRIDFPGFFRAYVEGSDDPNAAIEDQEVILPPLRQGDTPVCQEL
EAIGHETQPPARYTEASLVKTLESEGIGRPSTYASIIGTIIDRGYAQMVNNALVPTFTAF
AVTSLLEKHFPDLVDTSFTARMEQTLDDISTGEVQWLPYLKEFYLGETGLETQVRERENG
IDPNEARSVELENLDAKVRIGRFGAYLEVENGNELVKASIPKDLTPSDLDPEQVETLLRQ
KTEGPDKVGFHPETGEPIYLLIGTYGPYVQLGDATEENPKPKRASLPKGVTPEQVTLDMA
VGLLALPRTLGVHPDTGGRIQASLGRFGPYVVHDQGKEGKDYRSLKAGDDVLTITLERAL
ELLSEPKSGRGRRAAAKPLRELGAHPEDEEPVNIYDGPYGPYIKHGKVNASLPEGQTVEA
ITMDVALEALAAKAGAKKSGKGSKSSTAKSTRSASSTAKKTAAKKSTTKKSTTKKTTTSK
TTTTSSTKKKT
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcttgtcatcgtcgaatcacctactaaagcccgcaccatccgcaattacctg
cccaatgattaccgggtagaagcatcaatgggacatgtgcgtgatctgcctcagtcagcc
agtgaaattcctgccagcgtcaaaggtgagaagtgggcacagttgggcgtcaacgtcgag
gacaattttgaaccgctgtacgttgtccctcaggacaaaaagaaaattgttaaggaactt
aaggatgcgctgaaagcagcggatgagctaattctggcaacggacgaagaccgggaaggg
gaaagcattagctggcatttgttgcaactcttgcagccgaaggtgcccatcaagcgcatg
gtgttccatgagatcacggaagatgccattcgggaggcaattcaaaattgccggactgtc
gatgagcgcctggtgcgtgcccaggaaacccggcggattttagaccgactggtgggctac
acgctgtcaccgctgctgtggaagaagatcgcctatgggctttctgccgggcgggtacag
tcagtggcagtacgcctgctggtcaatcgggaacggcaacggcgagcgtttcgccagggt
tcctactgggatttgaaggcgaccctggtagcgacgagccaggagccaggagtcagaagt
caggaagcttttgaagcaaagctggtgacactaggcggaataaaggttgccacgggtagc
gactttgatgagacgactggtcaaatcgctcaggggcggaatgtggttctgctcaatgag
gcagaagcaagggcactggcagatcgaatccgcgatcgcacctggacagtaatcagtctg
gaagagcgtcccgtcacccgcaaaccgtctgccccgtttaccacctccaccctgcaacag
gaggcaaaccgcaaactggggctgtctgcccgtgacacgatgcgagttgcccagagtctt
tatgagcagggctacatcacttacatgcgaacagattcggtgcacctatctcagcaggcg
atcgccgctgcccgtgcctgcgtccaggaaatgtacggcgctgattacctcagccctgaa
ccgcgccagtacactaccaagagcaaaggggcgcaggaagcccacgaagcgattcgccct
gctggaaacaccttccgcactccgcaacaaaccggactgaaggatcgggaatttcgtctt
tatgacctgatctggaagcgtaccgtcgcaactcagatggcagaagcccgtcaaacccac
atcacggttcagattcaggtggaagatgccgggtttcgggcatcgggcaagcggatcgat
ttccctggcttcttccgagcctatgtcgagggttccgatgaccccaatgcggccatcgaa
gatcaggaagtgattctgcctcctctgcgccagggagatacgcccgtttgtcaagaactg
gaggcgatcgggcatgaaacccagccccccgcccgttacacggaagcgtctctggtcaag
accctggaaagcgaaggcatcggtcggcccagcacctatgccagcatcattggcaccatc
atcgaccggggctatgcccagatggtcaacaatgccctggtacccaccttcacggccttt
gccgtcacctccttgctggagaagcacttccctgatctggtagacaccagtttcaccgcc
cggatggagcaaaccctggacgacatttccacaggagaagtgcagtggctgccctatctg
aaagagttttacttgggcgaaactgggctggaaacccaggtcagagaacgggaaaacggg
attgacccgaacgaagcccgctctgtggagttggagaatctggacgcaaaagtgcggatt
gggcgctttggggcatacctggaagtcgaaaatggcaatgaactggtcaaggcttccatt
cccaaggatctgactccctctgacctcgatccagagcaggttgaaaccctgttgcgtcag
aaaacagaaggacccgataaagtcggcttccaccctgaaactggggaacccatttacctt
ctcatcggtacctatggtccctatgtccagctaggtgatgccaccgaggaaaatccgaag
ccaaaacgagcctctctgcctaaaggggtgacccctgagcaggtaaccctggacatggcc
gtagggctgcttgccctgccccggaccctgggagtccaccctgatactggcggtcggatt
caagccagtctgggacggtttggcccctatgtagtgcatgaccagggtaaggaaggaaaa
gactatcgttcgctcaaagcaggggatgatgtgctgaccattaccctggaacgtgctctg
gaattgctttcagaacctaaatctgggcggggtagacgggcggctgccaaacctctgcgc
gagttaggtgcccatccagaagatgaggaacccgtgaatatctacgatggtccctacggt
ccttatatcaagcacggaaaggtgaatgcttccctgccagagggacagacggttgaggcc
attacaatggatgtggctctggaagcgctggcggcaaaggcaggcgcgaagaagtctggt
aagggtagcaaatccagcacagcaaaatcgaccagatctgccagtagcactgcaaagaaa
actgctgccaagaaatcgacaacaaaaaaatcaacgaccaaaaagaccactaccagtaaa
accacgacaaccagcagcaccaagaagaaaacctag
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