Leptothermofonsia sichuanensis: J5X98_15215
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Entry
J5X98_15215 CDS
T07904
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lsk
Leptothermofonsia sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsk03400
]
J5X98_15215
Enzymes [BR:
lsk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J5X98_15215
DNA repair and recombination proteins [BR:
lsk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J5X98_15215
Prokaryotic type
J5X98_15215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QZZ18805
LinkDB
All DBs
Position
3561347..3562777
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AA seq
476 aa
AA seq
DB search
MSDLILFWHRRDLRIADNLGLAAARQRSARVIGVFCLDPDILGRDDIAPVRVAYLVGCLQ
KLKQRYSEAGSQLLILKAAPQEGIPRLAACLSASAVFFNQDVEPYSRDRDRAVAAALREQ
GVEVHHFWDQLLHPPQTIKTGSGQPYTVYTPFWRNWSRQPKADPCETLAGTQGLTDQEQA
LARQAGAIELPTAKELGFVWDRDLLVEPGEKAAQEMLENFCDRAITEYAEQRNFPAHPGT
SQLSAPLKFGVIGIRTVWAATQVALENTRSDEARAGIQTWQQELAWREFYQHVLYFFPQL
AEGPYRDSLKAFPWDNNEAHFQAWCEGKTGYPIVDAAMRQMNATGWMHNRCRMIVASFLT
KDLLINWQRGEKYFMQRLIDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAKKFDPDAE
YIRRWLPELAGVDTEALVTGKIPVEDCDRSGYPLPIVDHNQRQQEFKQRYQQQKQR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttgattctattctggcaccgtcgggatttgcggattgcagataatttagga
ttggcggcggctcgccagcgctctgccagggtgattggggtcttttgcctggatccagat
atcctggggcgggatgatatagcccctgttcgggtggcatacctggtgggttgcctgcaa
aagctgaaacagcgatattccgaggcgggcagtcagttgctcatcctgaaggcggctccc
caggaaggaattccccggctggcagcctgtctcagcgcttcggctgtattttttaaccag
gatgtggagccttattcccgcgatcgcgatcgggcggtggcggcggctctgcgcgagcag
ggggtagaggtccatcacttctgggatcaattgctgcatcctcctcaaacaattaaaacc
gggtcaggtcaaccctacacggtctacacccccttctggcgtaattggagtcgccagcca
aaagcagatccctgcgaaacactggcaggaacccagggattgaccgaccaggagcaggca
ctcgcccggcaggcaggagccatcgaattgcccacagcaaaagagttaggctttgtctgg
gatcgcgatttgctggtcgaaccgggggagaaggctgcccaggagatgctggagaatttt
tgcgatcgcgccattactgaatacgctgaacagcgcaactttcctgcccatccagggact
tcccaactcagtgccccgcttaagtttggtgtcatcggtatccgtaccgtttgggcagcc
acccaggtggcgctggaaaatactcgcagtgacgaagccagggctggaattcaaacctgg
cagcaagaactggcatggcgcgagttttatcagcatgtcctgtactttttcccgcaactg
gcagagggtccctaccgggactccttaaaagcctttccctgggataacaatgaagcacac
tttcaggcgtggtgcgaaggcaaaaccggctatcccattgtggatgcggccatgcgccag
atgaatgcaacgggttggatgcacaatcgctgtcggatgattgtggccagctttctgacc
aaagatttactgattaactggcagcgcggtgagaagtactttatgcaaaggctgattgac
ggtgacctggccgctaacaatggtggctggcagtggagtgcttccagcggtatggatccc
aaacccctgcgaatttttaacccggccagtcaggccaaaaagtttgaccccgatgccgaa
tatatccgccgatggctcccggaactggcaggtgtcgatacagaggctctggtgacgggt
aagattccagtagaggattgcgatcgcagcggctatcccctacctatcgtagaccacaac
cagcgacaacaggaatttaagcaacgatatcagcagcagaaacagcgatag
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