Leptothermofonsia sichuanensis: J5X98_16805
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Entry
J5X98_16805 CDS
T07904
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
lsk
Leptothermofonsia sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsk03021
]
J5X98_16805
Transcription machinery [BR:
lsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J5X98_16805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
HTH_10
MerR_1
HTH_25
HTH_29
DUF4143
HTH_20
DUF5315
Motif
Other DBs
NCBI-ProteinID:
QZZ19072
LinkDB
All DBs
Position
3952093..3953049
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AA seq
318 aa
AA seq
DB search
MKIAQTSTDLVRSYLREIGRVPLLTHEQEILFGKQVQRLSTLYEARDALAPQLGHAPTLE
EWAQCVSLSETDLQQAIAEGEYAKRKMVEANLRLVVSVAKKYTKRNVDLLDLIQEGTIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKLKKAQRHLAQ
KLGRAATAAELAEELEMTPRQVREYLERARQPLSLDLRVGDNQDTELGELLEDTGASPEE
FATQSSLKADLEKLMADLTPQQREVLALRFGLEDGQSLTLAKIGDRLNISRERVRQIERE
ALSKLRKRKAAIGEYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgcccagacctccacagatttagtgcgctcttatctgagagaaattggtcgt
gtgccgctactaactcacgagcaagagattctctttggcaagcaggtgcagcgtctatcc
actttgtatgaagcacgggatgctcttgctccccagttgggtcatgcacccacattggaa
gagtgggcacaatgcgtttctctttcagaaactgatttacaacaggcgatcgccgagggc
gaatatgccaagcgtaagatggttgaagcaaatctgcgtctggtcgtttctgtagctaaa
aagtacacgaagcggaatgttgatcttctggacctgattcaggagggcactattgggatg
cagcgtggggttgagaagtttgacccgacaaaggggtaccgcttttcaacctatgcctac
tggtggatccgtcaggcaattacgcgggcgatcgcggaaaaaggtcgcacgattcgtctg
cctatccacattacggaaaagctaaataagttgaagaaggcacagcgccatctggctcaa
aagctggggcgggccgctaccgctgccgaactggcagaagagttagaaatgactccgcgc
caggtgcgggagtatctggagcgggcacgccagcctctttctctggatctgcgcgtggga
gataaccaggatactgagctgggtgaattgctggaagatacgggcgcgtcaccggaagaa
tttgccacccagtcttcgctcaaggcggatctggagaagctaatggcagatttgacgcct
caacagcgagaagtgctggcactccggtttggactggaagatgggcaatcattgaccctg
gcgaaaattggcgatcgcctgaacattagtcgtgagcgagttcgccagattgagcgggaa
gccctgagcaagttgcggaagcggaaggcggcgatcggcgagtacctggcaagctaa
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