Leptothermofonsia sichuanensis: J5X98_16905
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Entry
J5X98_16905 CDS
T07904
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5X98_16905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsk03019
]
J5X98_16905
03400 DNA repair and recombination proteins [BR:
lsk03400
]
J5X98_16905
Enzymes [BR:
lsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5X98_16905
Messenger RNA biogenesis [BR:
lsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J5X98_16905
DNA repair and recombination proteins [BR:
lsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J5X98_16905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
Snapin_Pallidin
Sulfatase
Motif
Other DBs
NCBI-ProteinID:
QZZ19090
LinkDB
All DBs
Position
3975618..3977120
Genome browser
AA seq
500 aa
AA seq
DB search
MHLPSRTSQCATQASIRAKLQEIWGYSDFRPPQGDIVQCLLAQRDSLIIMPTGGGKSICF
QLPALLQPGLTLVVSPLVALMENQVQELRERHPSLRWSVASLHSELSKQQRRQTLWALEN
HKLRLLYLSPETLLSAPLWEKLCHPALKINHLILDEAHCLSQWGDTFRPAYFRLGTVRSA
LLQPKPAGSRIAIAAFTATADPHTQQTIQRILQLQQPEVFRLNPYRSNLSLNVQVVWTPR
GRRQQLLRFIQTHGNQAGLVYVRTRRDSEILAEWLSQQGYRTAAYHAGLSPDERRLIENT
WINDEIQFVVCTNAFGMGINKPNVRWVAHYHAPSLLSEYIQEVGRAGRDGRPATALTLIS
ETTGLLDSEDKQRWQFFENQTQKHQQMAQQLVKQLPPQGDVETVSRQFQGGALALSWLHG
AGQLQWQTPFRYELLRSAKTSSLADGNIRASQQMAKFLKTRNCRWKFLLSAFGFPAEAQS
LQCDRCDNCRKQDKGRGTNP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttccatcacgcacttcccagtgtgcaacccaggcatcaattcgggcaaaactc
caggaaatctggggatattcagactttcgtccaccccagggagacattgttcagtgttta
ctggcgcagcgagattcgctgatcatcatgccaacgggaggcggcaagtccatctgtttc
caacttccggcactgctgcaaccaggcttgactctggtggtttctcctctggtggcgcta
atggaaaaccaggtgcaggaattgcgcgaacggcacccttcgcttagatggtcggtggca
tcgttgcacagtgaactttctaaacagcaacgccgacaaaccctgtgggcattggaaaat
cataagctacggttgctctacctttcgccagaaacactgttgagtgcgccgctatgggaa
aaactatgccatccagccctgaaaatcaatcatctgattttggatgaagcccattgcctg
tcccagtggggagacacgttcagaccagcctattttcgattgggcacggtgcgatcggcg
ctacttcaacccaaaccagcgggaagtcgaattgccattgccgcctttacagctacggca
gatccccacactcaacaaacaatccagcggatcctgcaacttcagcaaccagaagttttt
cggctcaatccctatcgttctaacctcagtctaaatgtgcaagtcgtctggactccccgt
ggacgccgacagcagttgctcaggtttattcagacccatggaaaccaggcgggactggtc
tatgtccggacgcgccgcgacagcgaaatattggcagagtggctgagccagcaaggatat
cgaacagccgcctatcatgccgggttaagccccgatgagcgtcgtttgattgaaaatacc
tggattaatgatgagattcagttcgttgtctgtaccaatgcttttggcatggggattaac
aaacccaatgtcagatgggtagcccattaccatgctccctcattgctatcagagtatatc
caggaggtgggacgggcgggtagggatgggcgaccagccacggcattaactttaatcagt
gaaaccactggcttgcttgattcagaagataaacaacgatggcaattttttgaaaaccag
acgcaaaagcaccagcaaatggcgcaacagttggtaaagcagttaccccctcaaggagat
gtggaaacggtgagtcgtcagtttcagggtggtgcactggcactatcctggctgcatggg
gcaggtcaacttcaatggcaaaccccttttcgatacgaactgcttcggtcagcaaagacc
tcatccctggctgacggaaatatccgggcatcccaacagatggctaaatttctcaaaact
cgcaattgccgctggaaatttttgttgagtgcctttggttttccagcggaagcgcaaagc
ctccagtgcgatcgctgcgataattgccgcaaacaggataaaggcaggggaacaaatccc
tag
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