Leptothermofonsia sichuanensis: J5X98_17820
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Entry
J5X98_17820 CDS
T07904
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk02010
ABC transporters
lsk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J5X98_17820
03070 Bacterial secretion system
J5X98_17820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsk02000
]
J5X98_17820
02044 Secretion system [BR:
lsk02044
]
J5X98_17820
Transporters [BR:
lsk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J5X98_17820
Secretion system [BR:
lsk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
J5X98_17820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
AAA_21
cNMP_binding
Peptidase_C39
DUF87
AAA_16
RsgA_GTPase
AAA_30
AAA_24
nSTAND1
AAA_18
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QZZ19248
LinkDB
All DBs
Position
4169723..4172746
Genome browser
AA seq
1007 aa
AA seq
DB search
MHSFLTDFFAAWPFNALPVNLRERVASQLRLCCFQPGELIYHPRELPSAVHCIVQERVRI
LGPTSFQSPTLAVVGKGAVVGWDSLIRRVTAGSVRAAMGASGRAAKEDGDVLTLALPADE
FEAIALEHLLPVLTERVGVLEVFDTLFQCLSNMPGCPPDLNLKEIAHYIDQEQLAVVKHW
HGGEPEELELSPDYIWLVSGGEFLNLPIGTPIKRVNQLAQSRPSRFPVRLLGIDRSCMAS
TLLSHTLPGSVEHPGEQLAVAEPFDPESPVRFFAPPESPPANPAYPIWLALSPDPIEDVV
ACFGMVCDRLQVPFRPDSLRRSLKQPSARTIEPLDLYVRIAQAIGLSALVVRYTPTPGGI
NRLATPALIQCGDVFTVLHDVTPTKVVLGSPRTGLLHLDPTDLAERLHHASSAPELASCP
AIVLERLPTTPKKRFGFHWFLPMVLKQRGILIQVLLASMVIQLLGLANPLLVQQVIDNVI
VSANASAMTVFGVLMILFALLEGALTILRTYLLISTTNRIDLHLGVEIVRHLLHLPLNFF
EKRPVGELSSRLLELENIRQFMTDTAITTVMDVAFSLFYIGVMFLYSVRLTSCVLLTVPI
VIVSMLVMSSIQQKLIRVKAEQGAKVQSYLVEVLGGISSVKSQHMESLVEATWRDRYVQY
LTSGFTTSTVNTIFYSYSQFLNTISSLLVLWIGADLVLQGDLTLGGLIAFRILTGYVTGP
LLRLARLWQRFQETSLSMELLADIADSPAEEEISTEKVKLQMPVIAGHVQYHSISFGFKP
GQLQLTNVDLDIAPGTFVGIVGQSGSGKSTLMKLLPRLYVPQTGSITIDGYDISKVDLNS
LRSQVGIVSQDAVLFQGTIRDNISLFENLPDEEIIAAAQIAEAHDFIMQLPDGYNTQVGE
RGSNLSGGQRQRIAIARVVIRNPRLLIFDEATSALDYETERKVCTNLMQRFHDRTCFFIT
HRLNTIARADWILFMQSGIIVEQGTHPDLMTRRQLYYCLYSQQSREA
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgtttctaaccgattttttcgctgcctggcccttcaatgcgctgccagttaat
ttacgagagcgggttgcatcccagttgcgattgtgttgcttccaaccgggtgagctaatt
tatcaccccagggagttaccttcagccgttcactgcattgtccaggagcgcgttcgaatt
ctgggtccaacgtcgtttcaaagcccgaccttagctgtggtgggtaagggggctgtggta
gggtgggatagcctgattcggcgagtgaccgcagggtcggtccgggcggcgatgggtgct
tcaggacgtgccgcaaaggaagatggggatgtgttgaccctggcattaccagcggacgag
tttgaggcgatcgccctggagcatctgttgccggtcctgactgagcgggtgggggtgctg
gaggtgtttgacacgctgttccagtgcctgtcgaatatgcccggttgtccaccggatctg
aatttgaaggagattgctcactatattgaccaggagcaactggccgtcgtcaaacactgg
catggtggggaaccggaggagttagaactatcaccggattacatctggctggtcagtggt
ggagagtttctcaatttgccgattgggacaccgattaaacgggtcaaccagttggcacag
tcccgcccttcccggtttccagttcgcctgctgggaattgaccgttcctgtatggcatcg
acgctgctaagccatacccttcccggttcggtagaacatcctggcgaacaacttgccgtt
gcagaaccctttgatccggagtctccggtcaggttctttgccccgcccgaatctccccct
gctaaccctgcctatcccatctggctggcgctttcccctgacccaattgaagacgtggtg
gcgtgttttggtatggtctgcgatcgcctccaggttcccttccgtcctgattcactccgg
cgatcgctgaagcagccctcagccagaaccattgaaccattggatctatatgttcgcatt
gcccaggcaattggcttaagtgctctagtagtacgttatacacctaccccaggtggcatt
aaccgactggcgactccagcattgatccagtgcggtgatgtttttactgtcctgcatgat
gtaactccaactaaggttgtgctggggtccccccgcactggtctgttgcatctggatccg
actgatctggcagaacggctgcaccatgcttccagtgctcctgaactggcatcgtgtcca
gcgatcgtgctggagcggctaccaaccacccccaagaagcggttcggtttccactggttt
ttgccaatggtactgaagcagcggggcattttaatccaggtgctgttggcttcaatggtg
attcaactattggggctggccaatcccttactagttcagcaggttattgataatgtcatt
gtcagtgccaatgccagcgctatgacagtgtttggggtcttgatgattttgtttgccctg
ctggaaggtgctctcactattctgcgaacctatttattgatcagcaccaccaaccggatc
gatctgcatctgggagttgaaattgtccggcatttactccatttaccgctgaactttttt
gagaaacgtccagtgggagaactgtcgtcacgcctgctggaactggaaaatattcgccag
tttatgaccgatacagccattacgacggtgatggatgtggcattttctctcttttatatc
ggggtgatgtttctctatagcgttcgcttaaccagttgtgtgctgctgacagttccaatt
gtgattgtttccatgctggtgatgtccagtattcagcaaaagctaattcgcgtcaaagcc
gagcagggagcaaaggtgcagtcctatctggtggaggtactgggcggcatttcttccgtt
aagtctcagcatatggaatccctggtagaagcaacctggcgcgatcgctatgtgcaatac
ctcaccagcggtttcaccacttcaaccgtcaacaccatcttctattcctacagtcagttt
ctgaacactatcagcagtttgttagttctgtggattggggcagacctggtgttgcaaggg
gacctcaccctgggcgggctgattgcctttcggatcttaacgggctatgtaacaggtcct
ctgttgcggctggcgcggctgtggcaacggtttcaggaaacttccctgtcgatggaacta
ctggcagatattgccgattcccctgctgaagaagaaatttccactgagaaggtgaagttg
caaatgcctgtaattgcaggtcatgtgcagtatcacagcatcagctttggctttaagcct
ggacaacttcaacttaccaatgtagatctggacattgctcccggtacctttgtcggcatc
gttggccagagcggttccggcaaaagtactctgatgaagctactcccccgcctttatgtg
ccccagacagggagcattaccattgatggttacgacatcagcaaagtagatttaaattcc
ctgcgatcgcaggttggcattgtatcccaggatgcagttctgttccagggaaccatccga
gataacatttccctgtttgagaatctgcccgacgaagaaatcatcgccgctgcccagatt
gctgaagcgcacgatttcatcatgcagctacccgatggttacaatacccaggttggagag
cgggggagtaacctctccggtggacaacgccaacgaattgcgatcgcccgcgtcgtgatt
cgcaacccccgtctgctcatttttgacgaagccaccagtgccctcgactacgaaactgaa
cgcaaagtctgcaccaacctgatgcaacgatttcacgatcgcacctgctttttcatcacc
caccgtctcaatactattgcccgcgccgactggattctgtttatgcaatccggcatcatc
gtcgagcaaggaacccacccagacctgatgacacgccgccagctttactactgcctgtac
tcccagcagtcaagagaagcatga
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