Leptothermofonsia sichuanensis: J5X98_20945
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Entry
J5X98_20945 CDS
T07904
Name
(GenBank) RNA-binding protein hfq
KO
K03666
host factor-I protein
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk02024
Quorum sensing
lsk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5X98_20945
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J5X98_20945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsk03019
]
J5X98_20945
03036 Chromosome and associated proteins [BR:
lsk03036
]
J5X98_20945
Messenger RNA biogenesis [BR:
lsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
J5X98_20945
Chromosome and associated proteins [BR:
lsk03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
J5X98_20945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq_1
Hfq
DUF695
Motif
Other DBs
NCBI-ProteinID:
QZZ19760
LinkDB
All DBs
Position
4880220..4880435
Genome browser
AA seq
71 aa
AA seq
DB search
MTVEFETGLPSVRQIQNMIREEKEVELKLTTGDLLAGKISWQDPHCISLTDQYDQPTIVW
RQAIVYLKPRM
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagaatttgaaaccggattacccagtgtccgccagattcaaaacatgattcga
gaagagaaagaggttgaacttaaactgaccactggcgatctgctagctggcaagatcagt
tggcaggacccccattgtatttctcttacggaccagtatgatcagcccacgattgtttgg
cgacaggctattgtttacttgaaacccaggatgtag
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