Leptothermofonsia sichuanensis: J5X98_21825
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Entry
J5X98_21825 CDS
T07904
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
lsk
Leptothermofonsia sichuanensis
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsk03021
]
J5X98_21825
Transcription machinery [BR:
lsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J5X98_21825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_r3
HTH_23
HTH_24
KORA
HTH_AsnC-type
Sigma70_ECF
HTH_Tnp_1_2
HTH_3
LacI
HTH_Tnp_ISL3
HTH_38
HTH_Crp_2
HTH_11
HTH_8
HTH_10
Fe_dep_repress
HTH_17
HTH_50
HTH_30
UPF0122
DUF3958
TPM_phosphatase
DUF1492
MarR
HTH_31
KfrA_N
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
QZZ23706
LinkDB
All DBs
Position
5047311..5048093
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AA seq
260 aa
AA seq
DB search
MATQTSLRSHGMELLISYHQKPSVKVRNQLVQLNAGLVRKIAHRVSHQCAEPYEDLEQIG
YLGLIRAIERFNPNQGCAFSSFAVPYIRGEMLHFLRDRSGTVKIPRRWQQLNKEGQKVRE
AFVEEFGRQPTDDEIAEKLGVTVNEWRESKIATKNRLPLSLDATVCHQIDSPMTLGDTLP
DTRYQALQHLEEDRQQLQRAMNQLEEKTRQAIEFVFINDLSRKEVAERIGVSPMTVTRRI
HRGITQMVSLLQPMGLQTDP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggctactcaaacctctcttcgctcccatgggatggaattgctgatttcctaccaccag
aaaccctccgttaaagttcgtaaccagttggttcagttaaatgctggtctggttagaaag
attgctcaccgggttagccaccagtgcgctgaaccctatgaagatctggaacaaattggc
tacctgggtctgattcgcgccattgagcggttcaatcctaatcaaggttgtgcgtttagc
tcctttgcggttccctatattcggggtgagatgttacattttctgcgcgatcgcagcggt
accgttaagattccccgccgctggcagcaactcaacaaagaggggcaaaaagttcgagaa
gctttcgttgaagagtttggtcgccaacctacggacgatgaaattgctgaaaaacttggg
gtgactgtaaacgagtggcgcgagagcaagattgccaccaagaaccggttgcccctgagt
ctggatgccacggtttgccaccagattgactctcccatgaccctgggcgacaccctacca
gatacccgctaccaggcactgcaacacctggaagaagaccggcagcaactccagcgcgcc
atgaaccagttggaagagaagacccggcaggcgatcgagtttgtttttatcaacgacctc
tcccgcaaagaagtggctgagcggattggggtcagcccaatgacggtcactcgtcgaatt
caccggggaattacccagatggtttccttgctgcaacccatgggtctacaaaccgacccc
tag
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