Leptothermofonsia sichuanensis: J5X98_24805
Help
Entry
J5X98_24805 CDS
T07904
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J5X98_24805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsk03021
]
J5X98_24805
03400 DNA repair and recombination proteins [BR:
lsk03400
]
J5X98_24805
Enzymes [BR:
lsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J5X98_24805
Transcription machinery [BR:
lsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J5X98_24805
DNA repair and recombination proteins [BR:
lsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J5X98_24805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QZZ20425
LinkDB
All DBs
Position
complement(5739602..5741476)
Genome browser
AA seq
624 aa
AA seq
DB search
MPKLEQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGI
PSYMAILLDMALRDVEQIVYFNAYVVLNPGNAENLTYKQLLTEDQWIEIEDELYSEDSKL
TGVEVGIGAEALQRLLQDIDLEKEAEQLREEIATSKGQKRAKLIKRLRVIDNFIATGSQP
DWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLKIHQCGLPREMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRNDPTVWDVLEE
VIDGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
EAQAEARLLMLASNNILSPATGRPIITPSQDMVLGCYYLTAENPSASKGAGTYFANLSDA
IIAYEQQEVDLHAYVWVRFEGVVETDEPDTEVLEEHRAEDGTVTKLYKFRRVREDAEGNV
ISQYIRTTPGRIIYNKTIHDALAV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctagagcagcggttcgactatgtcaagattggtctggcgtctcccgaacga
attcgccagtggggagagcgtactctgccgaatgggcaggtagttggtgaggtgacgaag
ccggaaaccattaactaccggacattgaagccggagatggatgggctgttctgcgaacgg
atttttggtccggcaaaggactgggaatgccactgtggcaagtataagcgggtgcgacac
cggggtattgtttgtgagcgttgcggagttgaagtcacggagtcccgggtgcggcggcac
cgcatggggtatatcaaactggctgcccctgttgcccatgtctggtacctcaagggtatc
cccagttacatggcaattctgctggacatggcactgcgggatgtggagcagattgtttat
tttaacgcctatgtggtgctgaatccaggcaatgctgagaatctaacctataagcaactg
ctgacggaagaccagtggattgaaattgaagacgaactctacagtgaagattccaaactg
actggagtggaagtcgggattggcgcagaggctttacaacgcctgctccaggatattgat
ctggagaaggaagccgaacaactgcgggaagagattgcgacttctaaagggcagaagcgg
gcaaagctgatcaagcgtctgcgagtgattgacaacttcattgctacagggtcgcagcct
gactggatggtactttcagtgattccggtcatcccgcctgatctgcgcccaatggtgcag
ttggacggggggcggtttgccacctctgacttgaatgatttgtatcgccgggtgattaac
cgcaataaccgcctggcacggttacaggagattctggctcctgaaattatcgtccgcaat
gagaagcggatgcttcaggaagccgttgatgctctgattgataacggacggcgtggtcgc
accgttgtgggggctaataaccgtcccctcaagtccctatcggacatcatcgagggtaaa
caggggcgtttccgtcaaaacctgttgggtaagcgggtggactattctggtcgttctgta
attgtggttggtccaaaactaaagattcaccagtgcggattgccgcgggaaatggcgatc
gagctgttccaaccgttcgtgattcatcgcttgattcgccaggggctggtgaataacatc
aaggcggcgaaaaagctgattcagcgtaatgacccaacagtatgggatgtgttggaggaa
gtcattgatgggcatccggtcatgctgaaccgggcacccaccctgcaccgtctggggatt
caggcatttgaaccgattctggtggaaggacgggcgattcaactccatccgctggtttgt
cctgcatttaacgcagactttgacggtgaccagatggcagtgcacgttcccctttccctg
gaagcccaggcagaagcacggttgttgatgctggcctctaataatattctgtctcccgca
accgggcgtccgattattactcccagtcaggatatggttttggggtgctactatctgacc
gcagaaaatccaagtgccagcaaaggagcagggacttacttcgctaatctgagcgatgcc
atcattgcctacgagcaacaggaagtggatctccatgcctatgtctgggtgcggtttgag
ggtgtggttgaaaccgatgaaccggataccgaagttttggaggagcaccgggccgaggat
ggtactgtcaccaagctctataagttccgtcgggtacgggaagacgcggaaggcaatgtg
atttcccagtacatccgcacaacaccgggacggattatctacaacaaaaccattcatgat
gctctcgcagtgtag
DBGET
integrated database retrieval system
