KEGG   Leptothermofonsia sichuanensis: J5X98_25160
Entry
J5X98_25160       CDS       T07904                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
lsk  Leptothermofonsia sichuanensis
Brite
KEGG Orthology (KO) [BR:lsk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsk03400]
    J5X98_25160
Enzymes [BR:lsk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J5X98_25160
    5.6.2.6  RNA 3'-5' helicase
     J5X98_25160
DNA repair and recombination proteins [BR:lsk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J5X98_25160
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 HTH_Tnp_1
Other DBs
NCBI-ProteinID: QZZ20485
LinkDB
Position
5815577..5818015
AA seq 812 aa
MPVLEPILEPVLTWFAKQGWQPLPFQLETWQAYLAGRSGLIQVPTGSGKTYAAVVGAIAD
LLQAPARGLQLLYITPLRALSRDIEQSIQRPILEMGWNLRVESRTGDTTSARKTRQLKNM
PDILITTPESLAVMLAYPGARDLFQSLRGVILDEWHELMSSKRGTQTELSLSHLRGICPR
LQTWAVSATLGNAQEAAQVAVGRGVEPVVITTDLKRKTVIKSILPESVDTFPWAGHLGLH
MLEELVSALDIEKSTLIFTNTRFQSERWFQALTFAMPEQVDRIALHHSSIDVKEREAIEA
GLKSGAIKWVVCTSSLDLGVDFQPVERVVQIGSAKNLARLLQRAGRSAHVPQGTSEVLFL
PTHALELLEISGVRKGLAAGDVEVRRPLNKPYDVLIQHLVTLACGDGFRAEETLNHLRTT
VAYGNLTDAEFAWILEFITQGGQCLSSYPRYRKVVADNGLYRISDVQIARMHRMGIGTIT
SNQTVQIRYLKSQSKIGTVEESFISRLKKGDVFFFAGKPLEFFMLKDMVAYVKAAHKKST
VTPTWAGGNLAISDSLSRHLRRELEASRAASGLNQELSCVLPILSAQARISHLPATSELL
IEVCKTREGQHLYVFPFEGRFVHEGLGFLWGYRFASQKNATFTISVNDYGFEILAPKDYP
FKDLFSERFFERDRLHEDLKASLNLSELTSRKFRGIAQIAGLVFKGYPSAKKTANQLQVS
ASLIYEVFSKYEPDNLLLKQAETEALDEQLEVHRLARTLDRIQQLTLVWKETRRPSPFAF
PLLVERLNSRMSNESLLERIERMKQQWEKKDR
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgcctgttctggaacctattctggagcctgttctgacctggtttgcaaagcagggctgg
caacccctgccgtttcaactggaaacctggcaggcatacctggcgggcaggagtggcttg
atccaggtgccaacgggttcgggtaagacctatgcggcggtcgtgggagcgatcgccgat
ttgctgcaagcgcctgcccggggtctgcaactgctctacatcacgcccctgcgggcattg
tccagggatattgaacagtcgattcagcgtccgattctggaaatgggttggaacttgcgg
gtcgagtctcgcacaggggataccacgtccgcccgcaaaacccggcagcttaaaaacatg
ccggatattttaatcaccactccagagtccctggcggtgatgctggcctatcccggtgcg
cgggacctgttccagtctctgcggggagtgattctggacgagtggcatgagttaatgagt
tccaagcggggcacccagacggagttgagcctgtctcacctgcgcggtatttgcccgcgt
ttgcaaacctgggcggtgtcagccacgctggggaatgctcaggaagcggctcaggttgct
gtggggcggggtgttgagccagtggtgatcacaacggacctgaagcgaaagacggtgatt
aaaagtattctgccggagtcggtggatacgtttccctgggcgggacacctgggtttgcac
atgctggaagagctggtgagtgcgctggatattgagaaatccacgctgatttttaccaat
acccggtttcagtcggagcgatggttccaggcgttgacgtttgcgatgccagaacaggtc
gatcgcattgctttacaccatagctccattgatgtgaaagagcgggaggcgatcgaagcg
ggactcaaatccggtgcgatcaaatgggtggtgtgtacttcatccctggacttaggggtg
gattttcagcccgttgaacgggtggtgcagattggcagcgccaaaaacctggcgcgatta
ttgcagcgggcggggcgatcggctcatgtgcctcagggtacctctgaagtcttgtttcta
cccacccatgccctagaactgctggaaatctctggcgtgagaaaggggctggcggcaggc
gacgtggaagttcgccgtcccctgaacaagccctacgatgtcttgattcaacatttagtc
acccttgcctgtggagatggtttccgggcagaggaaaccctgaaccacctgagaaccacc
gttgcctatggcaatctgactgatgccgaatttgcctggattctggaatttattacccag
ggtggtcagtgtctgagttcctatccccgctaccggaaggtggttgcagacaatggactg
tatcgaatttcggatgtgcaaattgcccgcatgcaccggatgggcattggcaccatcacc
tcaaaccagaccgttcagattcgctatctcaagagccagagcaagattggcactgtggaa
gaaagctttatttccaggctgaagaaaggggatgtcttcttttttgccgggaaaccactg
gagtttttcatgctcaaggacatggtggcttacgtgaaggctgcccacaaaaaatccacc
gtaacccccacctgggcgggaggcaacctggcaatttcagactccctcagtcgtcacctg
cggcgcgaacttgaggcaagtcgtgcggcttccgggctgaatcaggagttgagttgtgtt
ttgccgattctgtctgcccaggccagaatttcccacctgccagctaccagcgaattgctg
attgaggtgtgcaaaacccgtgaaggccagcatttatatgtcttccccttcgagggccgg
ttcgtccatgaagggctggggttcctgtggggataccgctttgccagccagaaaaatgct
acgtttactatctcggtgaatgactacgggtttgaaatcctggcccccaaggattaccct
tttaaggatctgttttcggaacggttttttgagcgcgatcgcctccacgaagacctcaag
gccagcctcaatctctccgagttaaccagccgcaagtttcgtggcattgcccaaattgcg
ggactggtgttcaaaggctatccctcggcgaagaaaacggccaaccagctccaggtcagt
gcttccctcatctacgaagtgttttccaaatacgaaccagacaacctgttgctgaagcag
gcagaaacagaagcactcgatgagcagttagaagtgcaccgccttgccaggaccctggat
cgcatacagcaactcaccctggtctggaaagaaaccagacgcccttccccttttgccttt
ccactgctggtggagcgcttgaattcacggatgtccaacgaaagcctgctggagcgcatt
gaacggatgaaacagcaatgggaaaaaaaggacagatga

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