Leptothermofonsia sichuanensis: J5X98_26375
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Entry
J5X98_26375 CDS
T07904
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsk
Leptothermofonsia sichuanensis
Pathway
lsk03420
Nucleotide excision repair
lsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5X98_26375 (pcrA)
03430 Mismatch repair
J5X98_26375 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsk03400
]
J5X98_26375 (pcrA)
Enzymes [BR:
lsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5X98_26375 (pcrA)
DNA repair and recombination proteins [BR:
lsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5X98_26375 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
J5X98_26375 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DEAD
DUF1978
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QZZ20706
LinkDB
All DBs
Position
complement(6116100..6118457)
Genome browser
AA seq
785 aa
AA seq
DB search
MTQTTEFLSHLNASQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLVLTHRVDPENILA
VTFTNKAAREMKERIEKLFADREAQREHGKPLDSLSESQQTRLKSHVYKTITKNLWIGTF
HALCCRILRFDIEKYQDRNGRKWTRTFSIFDESDAQSLVKDIVINQLNLDDKKFDPRSVR
YALSNAKNQGWSPQDLEREQPNYRGRVISNVYSLYQDALAANNALDFDDLILMPVKLFRQ
NEQVRAYWHNRFRHVLVDEYQDTNRTQYDLIRLLVTNGEDTATFDNWHHRSVFVVGDADQ
SIYSFRAADFTILMDFQGDFGDRLPDDDTRTMVKLEENYRSTENILEAANQLIANNTERI
DKILRPTRGSGEPIFLHRADDETEEAEFVVQKIRKLEQDNPELKWNDFAILYRTNAQSRN
FEELLTRFNIPYKVVGGLRFYDRKEIKDVVAYLRAIANPYDTVSLLRVINTPRRGVGKAT
VDSLVRASQELNQPLWEILTDETSVKTLAGRSAKGVLSFARIIQKYREQLDTLPANEVIQ
GVLDDSGYVADLKAQGTEEADERLGNVNELYNAVLQFQEENEEDPSLIAFLANASLASDL
DNLEEGDNKVSLMTLHSSKGLEFPVVFLVGLEQGLFPNHRSIDNPVALEEERRLCYVGIT
RAQEQLFISYARARRLYGNREYAEPSLFLSELPREDMESNVKTAFPTRLTKTIAQARQAS
ETDSPLPNTHADDWTVGDRIIHKAFGTGQVTHIFGAGNKICLAVKFPNMGQKIIDPKLTP
LQRIE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgacggaatttctcagccatctcaatgcctctcagcggcaggccgtagag
cactactgtggtcccctgctggtggttgccggggctggttctggcaagacgcgggcactg
acctatcgcattgccaatctggtgctgacccaccgggttgacccggaaaacatcctggca
gtgacctttaccaacaaagccgccagggaaatgaaggagcggattgaaaagctgtttgct
gatcgcgaagcccagcgggaacacggtaaacctctggattccctttccgaaagccagcag
acccggctcaaatctcacgtctataaaaccatcactaaaaatctctggattggcacgttc
catgccctctgctgtcgaattctgcggtttgatattgaaaaatatcaggaccggaacggg
cgcaagtggacacgcaccttttctatctttgacgagtccgatgcccagagtctggtcaag
gatattgtgattaaccagctcaatctggatgacaaaaaattcgatccgcgatcagtgcgg
tatgccctcagtaatgccaaaaaccaaggctggtcccctcaagatctggagcgggagcaa
cccaactaccggggacgggtgatcagtaatgtttacagcctgtatcaggatgctctggca
gccaataatgccctggattttgatgacctgattctgatgcccgtgaaactgtttcgtcag
aatgaacaggtgcgggcttactggcataatcgcttccggcatgtgctggtggatgaatac
caggacacaaaccgtactcaatatgacctgattcgtctgctggtaacaaatggggaagac
acggcaaccttcgacaactggcaccaccgctctgtgtttgtggtgggggatgcggatcaa
tctatttattctttccgggcagcggatttcacaattctgatggattttcagggtgacttt
ggcgatcgcctccctgatgacgatacccgcacgatggtcaagctggaggaaaactatcgc
tccacagaaaacattctggaagccgccaaccagctaattgccaataacaccgagcggatt
gataagatcctgcgccccacccgtggcagtggggaaccaatcttcctgcatcgggcagat
gacgagacggaagaagcggagtttgtggtgcaaaaaatccgcaagctggaacaggataat
ccagaactgaaatggaacgactttgccattctgtatcgcaccaatgctcagtcccgcaac
tttgaagaactgttgacccgcttcaacattccttacaaagtggtgggcgggctgcggttc
tatgaccggaaggaaattaaggatgtggtggcatacctgcgggcgatcgccaacccctac
gacaccgtcagcctgctgcgggtgatcaatactcccaggcgaggcgttggcaaagccacc
gtggatagtctggtcagggcctcccaggagttaaaccagcccctctgggaaattttgacc
gatgaaacttcggtgaagaccctggcgggtcgttccgccaaaggcgtcttgagctttgcc
cggatcattcaaaaatatcgggagcaactggataccctgcctgctaatgaggtcatccag
ggtgtgctggacgattccggctatgtcgctgacctgaaggcacagggcactgaagaggca
gatgagcgcctgggtaacgtgaatgagctttacaacgccgttctccaattccaggaagaa
aacgaagaagaccccagcctgattgcctttcttgccaatgcctccctcgcctctgacctg
gacaatttggaagaaggcgataacaaagtgtccctgatgacactccactcctcgaaaggg
ctggagttccccgttgtatttctggtggggctggagcagggcttattccccaaccatcgc
tcgattgacaatccggttgccctggaagaggaacgccgcctctgctatgtcggtattacc
cgtgcccaggagcagttgtttatctcctatgcccgcgcccgccgcctgtatggcaaccgc
gagtacgccgaaccctccctgtttctgtcagaactgcccagggaagacatggaatccaat
gtcaaaactgccttccccacccggctcactaaaaccattgcccaagctcgtcaggcgagc
gaaaccgattccccccttcccaatacccatgcggatgattggacagtgggcgatcgcatc
atccacaaagcgtttggcacaggccaggtgacccatatcttcggtgctggcaacaaaatc
tgcctggcagttaaattcccaaacatgggacaaaagattatcgaccccaaactgactccc
ctgcagcgcatagagtaa
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