Ligilactobacillus salivarius UCC118: LSL_0123
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Entry
LSL_0123 CDS
T00337
Name
(GenBank) tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsl03016
]
LSL_0123
Transfer RNA biogenesis [BR:
lsl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LSL_0123
Prokaryotic type
Methyltransferases
LSL_0123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
GTP_EFTU
RsgA_GTPase
MMR_HSR1_Xtn
Ras
cobW
Roc
Cyc-maltodext_C
Arf
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABD98940
UniProt:
Q1WVH7
LinkDB
All DBs
Position
139402..140796
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AA seq
464 aa
AA seq
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MATMVPTEFDTIAAISTPPGEGAISIVRLSGEDAVKIANKVFKGKNLEKVPTHTINYGHI
VNPKTNEELDEVMVSVMLAPRTFTREDVIEINCHGGIVPTNQILQLLLSNGARLAEPGEF
TKRAFLHGRIDLTQAESVMDLIRAKTDRSMKVALNQLDGNLSHLIRNLRQDILDVLAQVE
VNIDYPEYDDVETLTTKMLREKAIEVKKSIQQLLTTAKQGKVLREGLATAIVGRPNVGKS
SLLNHLLHEDKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDKVERIGVERSR
KAIEQADLVMLVLNASEELTDEDKELIQATSGKKRIVILNKTDLPQKLNMDEVRELVPED
ELITTSVLKKTGVDKLEEKIAELFFGGIENSQSTIMVTNARHIALLNQAEDSLDAVLQGL
DSGMPVDLCQIDMTNAWDELGEITGDSYQDELLTQLFSQFCLGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctacgatggtaccaacagaattcgatacaattgctgcaatttcaactccccctgga
gaaggggcgatttcaattgttcgtttaagtggagaagatgctgttaagattgcaaataag
gtgtttaaaggaaaaaatttagaaaaagttccaacacataccattaattacggacatatt
gttaatcctaaaactaatgaagaacttgatgaagtaatggtgtcagtgatgttagcacct
agaacatttactcgtgaagatgttattgaaataaattgtcacggagggattgttccaact
aaccaaattctacaattattattatcaaatggagcaagattagcagaacctggtgaattc
accaagcgtgctttcttacatggaagaattgacttaactcaagcagaatctgtaatggat
ttaattagagctaagactgatcgttcaatgaaagtggctttaaatcaattagatggtaat
ttgtcacatttaattagaaacttacgtcaagatattttagatgttttggctcaagttgaa
gttaatattgactatccagaatatgacgatgttgaaacactaactactaagatgttacgt
gaaaaagcaattgaagttaagaagagtattcaacaattgttaacaactgctaagcaagga
aaagttctacgtgaaggtttggcaactgcaattgtagggcgaccaaatgttgggaaatct
agtctattgaatcacttacttcatgaagacaaagcaatcgtaacagatattgctggaaca
acacgcgatgtaattgaggaatatgttaatgtaagaggcgttcctttgaaattgatcgat
acagccggaatccgagaaactgaagataaggttgaaaggataggtgttgaacgttctaga
aaagcaatcgaacaagctgacttggttatgttggttttaaatgctagtgaggaattaact
gatgaagacaaggaattaatccaagctacaagtggtaagaagagaattgttatcttaaat
aagacagatttaccacaaaagcttaatatggatgaagtgcgtgaattagtgccagaagat
gaacttattacgacatctgttttaaagaaaacaggggtagataagttagaagaaaaaatt
gcagaactgttcttcggtggaatagaaaattcacaatctacaattatggtaacaaatgct
cgtcatattgctttattaaatcaagcagaagattctttagatgcagttttacaaggatta
gattcaggaatgccagttgacttatgccaaattgacatgacaaatgcctgggatgaacta
ggcgaaattacaggcgattcttaccaagatgaattattaacgcagttgtttagtcaattc
tgtctaggaaaataa
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