Ligilactobacillus salivarius UCC118: LSL_0124
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Entry
LSL_0124 CDS
T00337
Symbol
gidA
Name
(GenBank) Putative tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsl03016
]
LSL_0124 (gidA)
03036 Chromosome and associated proteins [BR:
lsl03036
]
LSL_0124 (gidA)
Transfer RNA biogenesis [BR:
lsl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LSL_0124 (gidA)
Prokaryotic type
LSL_0124 (gidA)
Chromosome and associated proteins [BR:
lsl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LSL_0124 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_binding_2
Pyr_redox_2
FAD_oxidored
Pyr_redox
AlaDh_PNT_C
ThiF
HI0933_like
Thi4
DAO
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABD98941
UniProt:
Q1WVH6
LinkDB
All DBs
Position
140820..142733
Genome browser
AA seq
637 aa
AA seq
DB search
MEFGKRYKAKDYDVIVVGAGHAGCEAALASARMGNETLLITINLEMVAFMPCNPSIGGPA
KGIVVREIDAMGGEMGRNIDKTYVQMRMLNTGKGPAVRALRAQADKRQYSIEMKHTIEQT
PHLTLRQGIVDDLIIEDGEVKGVVTNTGACYGAKSVVLTTGTAARGKIIIGELMYSSGPN
NTQPALELSKNLAKLGFELKRFKTGTPPRVDGNTIDYDKTEEQPGDVEPNHFSYESKDED
YLKVKDQLSCWLTYTNEYTHKIIQDNLDRAPMFTGVIEGVGPRYCPSIEDKIVRFSDKPR
HQLFLEPEGRNTDEYYVQGLSTSLPEEVQQEMVRSIDGLEHAEMMRPGYAIEYDVVSPYQ
LRPTLETKLIKGLYTAGQTNGTSGYEEAAGQGFIAGVNAGRRAKGLEEITLKRSDAYIGV
MIDDLVTKGTNEPYRLLTSRAEYRLILRHDNADLRLTELGHEIGLISDERYAAFEEKKAQ
IEAEKQRLSKIRIKPNAEVNAFVEAHGDRELKDGVLATEFLRRPYVTYQDLLKFIPAPAE
PLDRRVIEQIEIQFKYEGYIKKEYAKVEKLKRMEAKKIPARIDYSRIEGIATEAQQKLAK
IQPETLAQAGRISGVNPADLSILAVYIEQGKIARVDD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaattcggaaaaagatataaagctaaagactatgatgtaattgttgttggggcagga
catgctggatgtgaggcagccttagcttcagctagaatgggtaatgaaactttattaatt
acgattaaccttgaaatggttgcatttatgccatgtaatccatctattggtggaccagct
aaaggtattgtagttagagaaattgatgccatgggtggcgaaatgggacgtaatattgat
aagacttacgttcaaatgagaatgttgaatacaggtaagggacctgctgtacgtgcttta
agagcccaagctgacaagcgtcaatattctattgaaatgaaacatacaattgaacaaaca
ccacatttaactttacgtcaaggaattgttgatgacttgattattgaagatggtgaagtt
aaaggtgtagtaaccaatactggtgcttgctatggtgcgaaatcagtagttttaacaact
ggtacagctgctcgtggaaagattatcattggtgaattaatgtattcttctggtccaaac
aatactcaaccagctttagaactatctaagaacttagctaaattaggatttgaattgaag
agatttaagacaggtactccacctcgtgtcgatggaaatactattgattacgacaagact
gaagaacaaccaggtgacgtggaacctaaccactttagttatgaatctaaggatgaagat
tacttaaaagttaaggaccaattatcatgttggttaacatatactaacgaatacacacat
aaaatcattcaagataatttagacagggcaccaatgtttactggtgttattgaaggggtt
ggacctcgttactgcccatcaatcgaagacaagattgtacgtttttctgataagccacgc
caccaattgttcttggaacctgaaggacgtaataccgatgaatattatgttcaaggtttg
tcaacatctctaccagaagaagttcagcaagaaatggtacgctctattgatggcttagaa
catgctgaaatgatgcgtccaggttatgcaattgaatatgatgttgtttcaccatatcaa
ctaagaccaacattggaaactaagttgatcaagggactatacacagctggacaaactaac
ggtacttctggttatgaagaagctgcaggtcaaggctttattgctggtgtaaatgctggt
cgtcgtgctaagggactagaagaaatcactttgaaacgtagcgatgcttacatcggtgtt
atgattgatgatttggtaacaaagggaacaaatgaaccttatcgtcttctaacttcacgc
gcagaatatcgtttaattttgcgtcatgataatgcagatttacgtttaacagaattaggt
catgaaattggtttgatttcggatgaacgctatgctgcttttgaagaaaagaaagcacaa
attgaagctgaaaagcaaagactatcaaagattagaattaagccaaatgctgaagttaac
gcctttgtggaagctcatggtgatcgtgaattaaaagatggtgtgctagcaactgaattc
ttaagaagaccttatgtaacttaccaagatctattgaaattcatcccagcacctgctgaa
ccattagatagacgtgtaattgaacaaattgaaatacaattcaagtacgaaggatatatc
aagaaagaatatgctaaagttgaaaaactaaagcgtatggaagctaagaagattccagca
agaattgattactctcgtattgaaggaattgctactgaagctcaacaaaaattagctaag
attcaacctgaaacattagcacaagctggacgtatctcaggtgtaaatccagctgacttg
tccattttagctgtttatattgaacaaggaaagattgctagagttgacgattag
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