Ligilactobacillus salivarius UCC118: LSL_0196
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Entry
LSL_0196 CDS
T00337
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsl03110
]
LSL_0196 (clpC)
Chaperones and folding catalysts [BR:
lsl03110
]
Heat shock proteins
HSP100
LSL_0196 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
IstB_IS21
AAA_14
TniB
nSTAND3
AAA_18
UVR
ATPase_2
AAA_7
Zeta_toxin
RNA_helicase
bpMoxR
AAA_24
RuvB_N
DNA_pol3_delta2
NACHT
NBD_SMAX1
ABC_tran
TsaE
AAA_28
Torsin
Caprin-1_dimer
Motif
Other DBs
NCBI-ProteinID:
ABD99011
UniProt:
Q1WVA6
LinkDB
All DBs
Position
232289..234781
Genome browser
AA seq
830 aa
AA seq
DB search
MAMEERYTPSAKQVLVLAQQQANYFKHQAIGTEHLLLALTMEKNGVAAKVLQSFVVTEVD
VREEIEHIVGYGNLQRRGADTYLPYSPRTRYVLERAREHAKLFNVEKVGTEHILLALLED
DKTISSRILAALNIDLRKVKNITYRTMGVDATTANRTRKKLALSEKKQDNGTPTLDELAR
DLTEMVRKDQIDPVVGRDNEIKRVVQILSRRTKNNPVLLGEPGVGKTAVAEGFSQKIVNG
EVPDNLKNKRVMMLDMGSLVAGTKYRGEFEDRLKKIIEEIREDGNVILFIDEMHTLIGAG
GAEGAIDASNILKPALARGEVQVIGATTLNEYQKYVEADAALERRFASVTINEPTPEVAL
TILKGLRPKYEKHHQLQITDEALESAVKLSKRYIASRFLPDKAIDLMDEAAARVRINNAQ
KVDKVSAIKKKLSELSQEKTEALLKEDFEKAAEIRNEELKIQEKLEKQIQRDKDEEDSNN
YRVKVTAEDIAEVVSEWTGVPVTQINRSEGDRLIRLEKILHNRVIGQDEAVKAVSKAIRR
ARSGLKDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSMIRIDMSEYMEKYTTSRL
IGSPPGYVGYDEGGQLTEKVRNNPYSVVLLDEVEKAHNDVFNILLQVLDDGFLTDSKGRK
VDFRNTIIIMTSNLGATALRDEKSVGFGAKDVSDDYEAMAAKVRETLKKTFRPEFLNRLD
EIVVFHSLNKEEIHQIVKLMAKNIIDRIKEQNINLKITPAAIDIVAEAGFDAEYGARPIR
RILQDKIEDLLSEELLAGNIETGATVTIGAKKGEITIKVKNPVAAEKINS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaagaaaggtatacaccgagtgctaaacaagtattagttcttgcacaacaa
caagctaattacttcaagcatcaagcaataggaacagaacatttgcttttagcactaaca
atggagaaaaatggcgtagctgctaaagtattacaaagttttgtagtaactgaagtagat
gtgcgagaagaaattgaacatatcgtaggatacggtaatttacaacgtagaggcgctgat
acttatttaccatattccccaagaactcgttatgtattagagcgtgctagagaacatgct
aaactttttaatgttgaaaaggtaggaacagaacatattttgttagcactattagaagat
gataaaactatttcttcacgtattctagcagctctgaatattgatttacgtaaggtgaaa
aatattacctatcgtacaatgggtgtagatgcaacaacagctaatagaacacgtaagaaa
ttagcgttatcagaaaagaaacaggataatggtacacctacgttagatgaattagcgcgt
gatttgacagaaatggtgcgtaaagatcaaattgatccagtagttggtagagataatgaa
attaagcgtgttgttcaaattttaagtagaaggacaaagaataatccagttcttttggga
gaaccaggtgtaggtaaaacagctgttgcagaaggattttcacaaaagattgtaaatggt
gaagttcctgataatttaaagaataagcgtgtaatgatgcttgatatgggatctttggtt
gctggaacaaaatatcgtggtgaatttgaagatcgattaaagaagattattgaagaaatt
cgtgaagatggcaatgttattttattcattgatgaaatgcatactctaataggtgcgggt
ggtgctgaaggcgcgatagatgcttccaatattttaaaaccagcattagcgcgtggtgaa
gtacaagtaataggtgcaacaactttaaatgaatatcaaaaatatgttgaagctgatgca
gctttggaaagacgctttgctagtgtgacaattaatgaacccactccagaagtagcgttg
acaattctaaaaggattacgtcctaaatatgaaaaacaccatcaacttcaaattacagat
gaggcattagagagtgcagttaagttaagtaaaagatatattgcttcaagatttttacct
gacaaggcaattgatttaatggatgaggctgctgctagagtaagaattaataatgcacaa
aaagtggacaaagtttctgcaataaagaagaaattatcagagctttcccaagagaagaca
gaagcgttgttaaaagaagattttgaaaaagctgcagaaatcagaaatgaagaattaaag
attcaagaaaagcttgaaaagcaaatccaacgtgacaaagatgaagaggatagcaataac
tatcgtgtaaaagttacggctgaagatattgcagaagttgtttctgaatggactggtgtt
ccagtaactcaaattaatcgttctgaaggagaccgactaattagattagaaaagatattg
cataatcgagttataggacaagatgaagctgttaaagcagtaagtaaagcgataagaaga
gcaagaagtggtttgaaggatcctacaagaccaattggctcatttatgttcttaggtcct
acaggtgtaggtaaaactgaattagctaaagctttagcagaagctatgtttggctcagag
gattcaatgattagaattgatatgagtgaatatatggagaaatacacaactagtcgttta
attggatctcctcctggatacgtaggatatgatgaaggcggacaattaactgaaaaggtt
agaaataatccttattcagtagtattattagatgaagttgaaaaagctcataatgatgtt
ttcaatatcttgttacaagtattagatgatggatttttaactgattctaaaggtagaaag
gtagacttcagaaatacaattatcattatgacatctaacttaggtgctacagccttacgc
gatgaaaaatcagtaggttttggtgcaaaagatgtcagcgatgattatgaagcaatggca
gcaaaagttagagaaacattgaagaagacttttagaccagagttcttgaatcgtcttgac
gaaattgttgtattccattcgcttaataaagaagaaattcatcaaattgttaaattgatg
gctaagaatattatagataggattaaagaacaaaatattaatctgaaaattacccctgca
gcaatagatatagttgcagaagctggatttgatgctgaatatggtgctcgtcctattaga
cgtatccttcaagataagatagaggacttactaagtgaagaattattagcaggtaatatc
gaaactggagcaacagtaacaataggtgctaaaaaaggtgaaataacgataaaagttaag
aatccagtagctgcagaaaaaataaatagttaa
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