Ligilactobacillus salivarius UCC118: LSL_0534
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Entry
LSL_0534 CDS
T00337
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LSL_0534 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_0534 (xseA)
Enzymes [BR:
lsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LSL_0534 (xseA)
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LSL_0534 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RIF2_ASCE
EST1
Motif
Other DBs
NCBI-ProteinID:
ABD99343
UniProt:
Q1WUJ2
LinkDB
All DBs
Position
577519..578859
Genome browser
AA seq
446 aa
AA seq
DB search
MSKEYLTVSALTKYLHTKFTRDPYLRRVYLTGEISNFRRRATHQYFSLKDDNAVISVMMF
QSAFSKIKFEPEKGMKVLVSGRVDLYEKSGRYQIIIDTMQPDGVGALYQAYEQLVKKLRI
EGLFNEELKKPLVKYPKRIAVITSPSGAVIRDIITTTHRRYPIAQLVLFPAVVQGDDAAD
SLVGRLKQVNEEGNFDTIIIGRGGGSIEDLWPFNEEKVARAISDSKIPVISSVGHETDTT
IADLVADVRAATPTAAAELATPVLSEEIVKIKQYRLRIIQVLKNKISNYQQILDKVCSSY
ILQQPDRLYTGYAQNLDSLINRKNQAFKNLVYQNEKQLQLLESNLQHNNPSIRIKDEKNN
LQQLLEKMHLGMLGVFNDKSYKLEKLMSSLDMLSPLKVMNRGYSYILKDGKTVKNVKSLQ
PNDDVTLYFENGSAEARITKIREEKE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagaatatttaacggtaagtgctctgacaaaatatttgcatactaaatttact
cgtgatccttatttaagaagggtatatttaacaggtgaaatatctaattttagacgtaga
gctacacatcagtactttagtttaaaagatgataatgctgtgataagtgtaatgatgttc
caaagtgccttttcaaaaataaagtttgaaccagagaaaggaatgaaagttttggtctct
gggagagttgatttatatgaaaaatccggaagatatcaaataattattgatacaatgcaa
cctgatggagtaggtgcactatatcaagcatatgaacaactggtaaaaaaattacgaata
gaaggattatttaatgaagaattaaagaaacctttggttaaataccccaagagaattgct
gttattaccagtccatctggtgcagttattagagatattattactacaacgcatagacgc
tatccaattgcacaactagttttattcccagctgttgttcaaggagatgatgctgctgat
tctttagttggaagattaaaacaagtaaacgaagaaggaaattttgatacaataattatt
ggtagaggcggaggatcaatagaggatttgtggccttttaatgaagaaaaggttgctagg
gcaattagtgatagcaagattccagttatatcttctgtaggtcatgaaactgatacaaca
attgcagatttagtagcagatgttagagctgctacacctacagcagcagctgaattagca
acacctgtattgagtgaagaaatagtgaagattaagcagtatcgtttaagaataatacaa
gttctaaaaaataaaatatccaattatcaacagattttagataaagtatgtagttcatat
attttgcaacaaccagatagactatatacagggtatgcgcaaaatttagattcattgatt
aatagaaaaaatcaagcttttaaaaatttagtttatcaaaatgaaaaacaattacagtta
ttagaaagtaatttacaacataataatccaagcattagaattaaagatgaaaaaaataat
ttacaacagttattagaaaaaatgcatctagggatgttaggtgtttttaatgataaaagc
tataaattagaaaaattaatgtcatctttagatatgttaagtccattgaaagttatgaat
agaggatatagttatattttaaaagatggtaaaacagtaaaaaatgttaaatcattacag
ccaaatgatgatgtaacactttattttgaaaatggtagtgctgaagctagaataacaaaa
attagagaggaaaaagaataa
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