Ligilactobacillus salivarius UCC118: LSL_0720
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Entry
LSL_0720 CDS
T00337
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsl03032
]
LSL_0720 (topA)
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_0720 (topA)
Enzymes [BR:
lsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LSL_0720 (topA)
DNA replication proteins [BR:
lsl03032
]
Prokaryotic type
DNA Topoisomerases
LSL_0720 (topA)
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LSL_0720 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABD99530
UniProt:
Q1WU05
LinkDB
All DBs
Position
765005..767116
Genome browser
AA seq
703 aa
AA seq
DB search
MPTTQKPKKKTTKRTRKKNLVIVESPSKAKTIEKYLGSNYKVMASLGHIRDLPKSKMGID
VENGYEPHYISIRGKGDVIKELRKEAKKASHVYLAADPDREGEAIAWHLSYLLGLNPEDK
NRVVFNEITKDAVKNAFKSPRSIDMNLVDAQQARRVLDRLVGYSISPLLWSKIKKGLSAG
RVQSIALNLIIQREKEIRDFKPEEYWTIDAKFKKGRTKFEADFWGVDNKKKKLSNEKDVK
EVIEKIDKDKPFNVINIEQKERKRMPPLPFTTSAMQQTANNNLKFRTQKTMMVAQQLYEG
INIGRGGAVGLITYMRTDSTRISSVAKHEAAVFLHENYGEEYAASKPRQGKLSENAQDAH
EAIRPSSVERTPEKMAKYLDKDQLKLYTLIWSRFVASQMTPAVFDTMRVDIEQNGVQYRA
NGSKMKFPGFIKVYKAATSKDNLLPELKVGDEVDMVQNQPNQHFTLPPARYSEATLIRTL
EENGVGRPSTYAPTLSTIQKRYYVKLVSRKFEPTELGEIVNSMIEECFPDILNVDFTAHL
EDQLDDVEEGKEEWVRIIDEFYQPFSKEVDNAQVKMDKIKIKDEPAGIDCEICGAPMVIK
LGRYGKFYACSRFPDCRNTKAIVKEIGVVCPKCHKGQIIERKSKKNRVFYGCSLYPDCDF
VSWDKPIGRDCPKCSHYLVEKKTKKGMQVKCSNCDYEEAIQNN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcctactactcagaaaccaaagaaaaagacaacgaaaagaacacgaaagaaaaattta
gtaatagtagaatcgccctccaaagcgaaaacaattgaaaagtatttaggatcaaactat
aaggttatggccagtttaggtcatattcgagatttacctaagagtaagatggggattgat
gttgagaatggatatgaaccacattatatctctattcgtggtaaaggtgatgttataaaa
gaacttagaaaagaagcaaaaaaagctagtcatgtttatctagcagccgatccggaccgt
gaaggagaagctattgcttggcatttatcatatcttttaggattgaacccggaagataaa
aatcgcgttgtgtttaatgaaataaccaaagatgctgtaaagaatgcatttaaatcacca
cgttcaattgatatgaatttggtagatgcacaacaggctagacgtgtgttagataggctt
gttggttactcaatttcaccattgttgtggtcaaagataaagaagggcctttctgctgga
cgtgtacaatcaatagcattgaatttaattatccaacgtgaaaaagagattcgagacttt
aaacctgaagaatattggactattgatgctaagtttaaaaaaggtagaactaaatttgaa
gctgacttctggggtgtagataataagaagaaaaaattatctaacgagaaagatgttaaa
gaagtcattgaaaagattgataaagataaacctttcaacgttattaatattgaacaaaaa
gaacgtaaaagaatgccaccattaccatttacaacttcagcaatgcaacaaactgctaac
aataatttgaagtttagaactcaaaaaacaatgatggttgcacaacaattatatgaaggt
attaatattggacgaggtggagctgtaggtttaattacttacatgcgtactgactctact
cgaatttcgagtgttgctaagcatgaagcagctgtctttttacatgaaaattatggtgaa
gaatatgctgcttctaaaccacgtcagggtaaattatctgaaaatgcacaggatgctcac
gaagctattcgaccatcatcagttgaacgtacacctgaaaagatggctaagtatttagat
aaggatcaattaaaactatatacattgatttggtcaagattcgtagcaagtcagatgaca
ccagccgtttttgatactatgcgtgtagatatagaacaaaatggagttcaatatcgtgca
aatggttctaagatgaaattccctggatttattaaggtatataaagcagcaacaagtaaa
gataacttattgccagaattgaaggttggcgatgaggttgacatggttcaaaatcaacca
aatcaacattttactttaccaccagctcgctattctgaagctactttaattcgtacttta
gaagaaaatggtgtaggtcgaccatctacttatgcacctactttaagtacaattcaaaag
cgttattacgtgaagttagtctcacgtaagtttgaaccaactgaactaggcgaaattgtt
aattccatgattgaagaatgtttccctgatattttaaatgttgattttacagctcatttg
gaagatcaattagatgatgttgaagaaggaaaagaagaatgggttagaattatagacgaa
ttctaccaacctttttctaaggaagttgacaatgctcaagtaaagatggataagattaag
atcaaagatgagccagcaggaattgattgtgaaatttgtggtgctccaatggtcattaaa
ctaggtcgttatggtaaattctatgcctgcagtcgtttcccagattgtcgaaatactaag
gcgatagttaaggaaataggcgtagtttgtcctaaatgccataaaggtcaaattatcgaa
cgcaaatctaagaaaaatagagtcttctatggttgctcattgtacccagattgtgacttt
gtttcttgggataaaccaattggacgtgactgtccaaaatgcagtcattacttagtagaa
aagaaaactaagaagggcatgcaagttaaatgtagtaattgtgattatgaagaagcaatt
caaaataattaa
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