KEGG   Ligilactobacillus salivarius UCC118: LSL_0871
Entry
LSL_0871          CDS       T00337                                 
Symbol
gyrB
Name
(GenBank) Topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
lsl  Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:lsl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsl03032]
    LSL_0871 (gyrB)
   03036 Chromosome and associated proteins [BR:lsl03036]
    LSL_0871 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lsl02048]
    LSL_0871 (gyrB)
Enzymes [BR:lsl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LSL_0871 (gyrB)
DNA replication proteins [BR:lsl03032]
 Prokaryotic type
  DNA Topoisomerases
   LSL_0871 (gyrB)
Chromosome and associated proteins [BR:lsl03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LSL_0871 (gyrB)
Prokaryotic defense system [BR:lsl02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LSL_0871 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: ABD99681
UniProt: Q1WTS6
LinkDB
Position
893358..895379
AA seq 673 aa
MPKNNYNDDSIQVLKGLEAVRKRPGMYIGSTDSRGLHHLVYEIFDNAVDEALSGYGKEIN
VIIHKDDSITVVDNGRGMPVGMHSMGIPTVEVIFTVLHAGGKFGQGDYKTSGGLHGVGAS
VVNALSSKLTVNTVRDGIEYEEDFVNGGQPVGTLRKIGKAKRKSGTKVTFKPDANIFSTT
KYNFNTLAERLRESAFLLKGVKITLTDERTDPYTEEEFLYAEGIKEFVEYLNEDKDVLGP
VMYFEGKKDGIEVEVAGQYNDGYSETIMSFVNNVRTKDGGTHEAGMKAAWTKAFNEYARK
INLLKDKDKNLEGSDVREGLSAVVSVRIPEELLQFEGQTKGKLGTPEARQIVDSVVNEQL
GYFLMENGDFAQELVRKSIKAREAREAARKARDESRNGKKRRKSERLLSGKLTPAQSKNA
KRNELFLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTQKAKLQDIMKNEEINTMIYTIG
AGVGAEFNINDANYDKVIIMTDADTDGAHIQTLLLTFFYKYMRPMINAGRVYIALPPLYK
IEKTVKKKRVIKYAWTDAELESATKELKKGYTLQRYKGLGEMNADQLWETTMNPETRTLV
RVRIDDDTIAEKRVTTLMGDKVEPRRKWIEKNVKFTLEEDGSLLDTVVAEGAHGEISDDK
LKDTEALFDKNDY
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgccaaagaataattataatgatgattcaattcaagttctaaagggcctagaagctgtt
agaaagcgtcctggaatgtatataggctctacagattcacgtggattacatcacttagta
tatgaaatatttgataacgcagttgatgaagcactatctggttatggcaaagaaattaac
gttattattcataaagatgattcaataacagtagtcgataacggacgtggaatgccagtt
ggaatgcattcaatgggaattccaacagtagaagtaatttttaccgttttacatgcaggt
ggtaaatttggccaaggcgactataaaacttcaggcggattacacggcgttggtgcttct
gtcgtcaacgcactctcctcaaagttaactgtaaatactgttcgagatggaattgaatat
gaagaagattttgttaacggtgggcaacctgtaggaactttacgtaaaattggtaaagct
aaacgtaaaagtggtacaaaagtaacttttaaacctgatgctaatattttttcaacaaca
aaatataattttaatactttagcagaaagattaagagaatctgctttcttattaaagggt
gtaaagattactttaacagatgaaagaaccgacccatatactgaagaagaattcttatat
gcggaaggaattaaagaattcgtagaatatttaaatgaagataaagatgtattaggtcct
gtcatgtactttgaaggtaaaaaagatggtatcgaagttgaagttgcgggccaatataat
gatggatattctgaaactataatgtcatttgttaataatgttcgtactaaagatggtggg
acacacgaagctggaatgaaagctgcatggactaaggcttttaatgagtatgctagaaaa
attaaccttcttaaagacaaagataagaatcttgaaggtagtgacgttcgtgaaggactt
tcagcagttgtttctgttcgcattcctgaagaattactacagtttgaaggacaaactaaa
ggaaaattaggaactcctgaagctcgtcaaattgttgatagtgttgttaatgagcaatta
ggttatttcttaatggaaaatggtgattttgcccaagagttagttcgaaaatctattaag
gcacgcgaagcacgtgaagcagctcgtaaagcacgtgatgaaagtagaaatggcaaaaag
agacgtaaaagcgaacgcctattatcaggtaagttaactcctgcgcaatctaagaatgct
aaacgtaatgaattgttcctagtcgaaggtgattctgccggtggttcagcaaaacaagga
agagatagaaaattccaagcaatcctaccattacgaggaaaagtattaaatacacaaaaa
gccaaattacaagatatcatgaagaatgaagaaatcaataccatgatttatactattggt
gctggagtaggtgcagaatttaacatcaatgatgcaaattatgataaggttattatcatg
actgatgctgatactgatggtgcacatatccagacattgttattaacgttcttctataag
tatatgcgaccaatgattaatgcagggagagtatacattgcattaccaccattatataag
attgaaaaaactgttaagaaaaagcgcgttattaagtatgcatggactgatgctgaatta
gaaagtgctactaaagaacttaaaaaaggatacactttacaaagatataaagggttagga
gaaatgaacgctgatcagctttgggaaacaaccatgaatccggaaacaagaacgttggtt
cgtgtgagaatagatgatgatacaatagctgaaaaacgtgttacaactctaatgggtgat
aaagtagaacctcgtcgtaagtggattgaaaaaaatgttaaatttactttagaagaagat
ggaagtttgttagatacagttgtcgctgaaggagctcatggcgaaatttctgacgataag
ttaaaggatacagaggctttatttgataaaaatgattattaa

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