Ligilactobacillus salivarius UCC118: LSL_0885
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Entry
LSL_0885 CDS
T00337
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsl03032
]
LSL_0885
03036 Chromosome and associated proteins [BR:
lsl03036
]
LSL_0885
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_0885
DNA replication proteins [BR:
lsl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LSL_0885
Chromosome and associated proteins [BR:
lsl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LSL_0885
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LSL_0885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Rpf1_C
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ABD99695
UniProt:
Q1WTQ5
LinkDB
All DBs
Position
complement(909069..909344)
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AA seq
91 aa
AA seq
DB search
MANKAALIERVAEKTGLTKKDATVAVDAVFETIQDALVDGEKVQLIGFGNFEVRERAARK
GRNPQTGEEIEIPASKVPAFKPGKSLKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcagcattgattgaacgcgttgcagaaaagacaggtttaactaagaaa
gatgcaacagttgctgttgacgcagtttttgaaacaattcaagacgcattagttgacggt
gaaaaagtacaattaatcggttttggtaactttgaagtacgtgaacgtgcagctcgtaag
ggtcgcaacccacaaacaggagaagaaatcgaaattccagcaagcaaagttcctgcattt
aagccaggtaaatctttgaaagacgctgttaaataa
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