Ligilactobacillus salivarius UCC118: LSL_1093
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Entry
LSL_1093 CDS
T00337
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsl03016
]
LSL_1093
Enzymes [BR:
lsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LSL_1093
Transfer RNA biogenesis [BR:
lsl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LSL_1093
Prokaryotic type
LSL_1093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
SH3_3
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ABD99901
UniProt:
Q1WT50
LinkDB
All DBs
Position
complement(1121823..1122776)
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AA seq
317 aa
AA seq
DB search
MELEFLGTGAGSPSKSRNVSAVALKLLDEIKKIWLFDVGEGTQHQILNTTIRPRKIDKIF
ITHMHGDHIFGLPGFLSSRSFQGGEKMGPLTIYGPKGISDFVNISLKVSQTKLSYELNFV
ELEEEGLLLENDRFKVYAYKLDHRIECWGYRIEEKDYPGELQVEKLREAKAPSGPIYGRL
KAGEVVTLEDGRTIDGKDFIGKAKKGRIVTILGDTRQTPNLKLLAKDADVLVHESTFGKG
EGKLARNYHHSTCVQAATLAKEVGVKQLLLTHISARYVGKMVKVLEKEAKKVFPNTKVVK
DFDTFNIPFPERKDDEQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaattagaatttttaggaacaggtgctggatcaccttctaagagtaggaatgtatca
gcagttgcattaaagttattggatgagattaaaaagatttggttgtttgatgtaggtgaa
ggaacacaacatcaaattttaaacacaacaattcgtccacgtaagattgataaaatattt
ataactcatatgcatggtgatcatatttttggattacctggctttttgagtagtcgttca
ttccaaggcggcgaaaaaatgggaccattaacaatttatggacctaaaggaatttctgat
tttgttaatattagtttaaaagttagtcaaacaaaattatcatatgaattaaatttcgta
gaacttgaagaagaaggtttacttttagaaaatgatcgatttaaagtttatgcttataaa
ttagatcatcgtattgaatgttggggctacagaattgaagaaaaggattatccaggtgaa
ttacaagttgaaaaacttagagaagctaaagctccatctggaccaatctatggtcgcctt
aaagctggagaagtagtcacacttgaagatggtagaactatagatggtaaggactttata
ggtaaagctaagaaaggccgaattgtaacaattttaggtgacacaagacagacacctaac
ttgaaattacttgctaaagatgcagatgtgttagttcatgaaagtacttttggtaagggt
gaagggaaattagcacgtaattatcatcactcaacttgtgttcaagctgctactttagct
aaagaagtaggggtaaaacaattactgttaactcatatttcagctcgttatgtgggcaag
atggtgaaagttttagaaaaagaagctaagaaagtattcccaaatactaaggttgttaaa
gattttgatacctttaatattccttttcctgaaagaaaggacgatgagcaatga
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