Ligilactobacillus salivarius UCC118: LSL_1171
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Entry
LSL_1171 CDS
T00337
Name
(GenBank) ATP-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsl03019
]
LSL_1171
Messenger RNA biogenesis [BR:
lsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LSL_1171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_21
AAA_22
AAA_18
DUF2380
AAA_33
AAA_16
AAA_28
SKI
Motif
Other DBs
NCBI-ProteinID:
ABD99979
UniProt:
Q1WT77
LinkDB
All DBs
Position
complement(1205871..1206758)
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AA seq
295 aa
AA seq
DB search
MFMSALQLVIVTGMSGAGKTVAVQSFEDLGYFCVDNMPPKLLPKFYELVKESGKITKIAL
VVDLRSRAFYDEIVEMVRELDENEFNSSRILFLDASDEELVARYKETRRSHPLAMEGRIL
DGIHLERELLAPIKSNAQIIIDTSKLSPRQLREEIFKNFEARDTKTFHIEVMSFGFKYGL
PIDADIVMDVRFLPNPYYVSELRNKTGKDDAVYEYVMKSEKTEEFYQKFVSLLKYVIPGY
IAEGKSNVTIAIGCTGGQHRSVALAERIGNELSKEYPVHMSHRDMNKRKETVNRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgagtgcattgcaattagtaatagttaccggaatgagtggtgctgggaaaaca
gtagctgtacagagttttgaagatttaggttatttttgtgtggataatatgccgcctaaa
ttattgcctaaattttatgaattggttaaggaatctgggaaaataacgaaaatagcatta
gtagtagatttaagatctcgtgctttctatgatgaaattgtagaaatggtgagagaatta
gatgaaaatgaattcaattcttctagaatattgtttttagatgcttcagatgaagaacta
gttgctagatataaagaaactagaagatctcatccgctggctatggagggaagaatttta
gacggaattcatttagaaagagaactattggcaccaattaagtcaaatgctcaaatcatc
attgatacctctaaattatctccacgtcaactaagagaagagatatttaagaatttcgaa
gccagagataccaaaactttccatattgaagttatgtcatttggtttcaaatatggatta
cctatagatgcagatattgtcatggatgtacgtttcttacctaatccttattatgtgtcg
gaattgcgaaataaaactggtaaggatgatgctgtatatgaatatgtgatgaaatctgag
aaaacagaagaattttatcaaaaatttgtatctcttctaaaatatgtaattccaggttat
attgcagaaggaaaatctaatgtaacaattgcaattggatgtacagggggacaacatcgc
tcagtagcattagctgaaagaataggtaatgaactatctaaagagtatccggttcatatg
tcacatcgtgatatgaataaacgaaaggagacggtgaatcgctcatga
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