Ligilactobacillus salivarius UCC118: LSL_1211
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Entry
LSL_1211 CDS
T00337
Symbol
groL
Name
(GenBank) 60 kDa chaperonin GROEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LSL_1211 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsl03019
]
LSL_1211 (groL)
03110 Chaperones and folding catalysts [BR:
lsl03110
]
LSL_1211 (groL)
03029 Mitochondrial biogenesis [BR:
lsl03029
]
LSL_1211 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsl04147
]
LSL_1211 (groL)
Enzymes [BR:
lsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LSL_1211 (groL)
Messenger RNA biogenesis [BR:
lsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LSL_1211 (groL)
Chaperones and folding catalysts [BR:
lsl03110
]
Heat shock proteins
HSP60 / Chaperonin
LSL_1211 (groL)
Mitochondrial biogenesis [BR:
lsl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LSL_1211 (groL)
Exosome [BR:
lsl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LSL_1211 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LSL_1211 (groL)
Exosomal proteins of breast cancer cells
LSL_1211 (groL)
Exosomal proteins of colorectal cancer cells
LSL_1211 (groL)
Exosomal proteins of bladder cancer cells
LSL_1211 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
ABE00019
UniProt:
Q1WSW0
LinkDB
All DBs
Position
complement(1246385..1248007)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKEIKFSEDARSKMLKGVDKLANTVKSTIGPKGRNVVLEQSYGSPTITNDGVTIAKATD
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIE
LATKAAVDALHEMSHTVESKSDIAQVASISSANEEVGKLIADAMEKVGNDGVITIEESKG
IDTSLDVVEGMQFDRGYLSQYMVTDNDKMEADLDNPYILLTDKKISNIQEVLPLLQSIVQ
QGRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLQDIATLTGATVIT
DDLGLQLKDTTVEQLGSAGKVTVTKENTTIVEGAGDKDKIAERVEQIKKQISETTSDFDR
EKLQERLAKLSGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGFVPGGGTALVNV
IGKVAALEEEGDVQTGINIVKRALEEPVRQIAENAGLEGSVIVEKLKEQKPGVGFNAATN
EWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADKPEPESNNQMPATPGMGGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaattaagttttcagaagatgctcgttcaaagatgttgaagggtgtagat
aaattagcaaatacagtaaaatcaactattggtcctaaaggtcgtaatgttgttttggaa
caatcttatggttccccaacaattacaaatgatggtgtaacaattgctaaggctactgat
ttagaagatcatttcgaaaatatgggagcaaaattggtgtctgaagttgcttctaagaca
aatgatatcgcaggtgatggtacaacaactgctactgttttaacacaagctattgtaaat
gaaggtatgaagaatgtaactgctggtgcaaacccagttggaattcgtcgtggtattgaa
ttagcaactaaggctgcagttgacgcattacatgaaatgtctcatacagtagaatccaag
agtgatattgcacaagttgcttctatttcatctgctaacgaagaagttggtaaattaatt
gctgatgctatggaaaaagttggtaacgatggtgttattacaattgaagaatccaaaggt
atcgatacttctttagatgttgttgaaggtatgcaatttgatagaggatatctatcacaa
tatatggtaacagataacgataagatggaagctgatttagataatccatatattttatta
acagataagaagatttcaaacattcaagaagtattaccattattgcaatcaattgtacaa
caaggtcgtccattattgattattgctgatgatgtagatggcgaagcattacctacactt
gttttgaacaagattcgtggaacatttaacgttgttgcagttaaggctccaggatttggc
gatcgtcgtaaggcaatgttacaagatattgctacattgacaggtgctactgttatcaca
gatgacttaggcttacaattgaaagatacaacagttgaacaattaggttctgctggaaaa
gtaacagtaactaaggaaaatacaacaattgttgaaggcgctggtgacaaggacaagatc
gctgaacgtgtagaacaaattaagaagcaaatcagtgaaacaacttctgattttgatcgt
gaaaaattacaagaacgtttggctaaattatctggtggtgtcgcagttattaaagttggt
gctgcaactgaaacagaattgaaagaacgtaagtaccgtattgaagatgctttgaatgct
acacgtgctgctgttgaagaaggatttgttcctggtggtggtacagcattggtaaatgtt
attggtaaagttgctgctttggaagaagaaggcgacgtacaaacaggtattaacattgta
aaacgtgctttggaagaacctgttcgtcaaattgcagaaaatgcaggtttagaaggttct
gtaattgttgaaaaattaaaggaacaaaaaccaggtgtaggtttcaatgctgctacaaat
gaatgggttgacatggttgaagctggtattgtggatcctacaaaggtaactcgttcagca
cttcaaaatgcagctagtgtatctgctttattattgacaacagaagcagtagttgctgat
aagccagaaccagaaagtaacaaccaaatgcctgcaacaccaggtatgggcggtatgatg
taa
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