Ligilactobacillus salivarius UCC118: LSL_1349
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Entry
LSL_1349 CDS
T00337
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl03420
Nucleotide excision repair
lsl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSL_1349 (pcrA)
03430 Mismatch repair
LSL_1349 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_1349 (pcrA)
Enzymes [BR:
lsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSL_1349 (pcrA)
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSL_1349 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LSL_1349 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_11
FWWh
Terminase_6N
DUF7233
Motif
Other DBs
NCBI-ProteinID:
ABE00154
UniProt:
Q1WSH5
LinkDB
All DBs
Position
complement(1403083..1405317)
Genome browser
AA seq
744 aa
AA seq
DB search
MTDNMFLSGMNDKQSEAVLCTEGPLLIMAGAGSGKTRVLTHRVAYLIEEKGVNPWNILAI
TFTNKAAREMRERVNNLMGEGAEDIWVSTFHALCVRILRRDAEKIGFNRSFTIASTSEQR
TLMKQVLNDLNIDTKKYDPRAILSVISNAKNDLLDPKDYAQQANGPFEEIVSKAYFEYQN
QLANNQAMDFDDLIMQTIRLFNESSETLEFYQRKFHYIHVDEYQDTNEAQYELVNKLARK
YRNLCVVGDADQSIYGWRGANMENIMNFEEDYPDATVIKLEQNYRSTKNILAAANNVIEN
NVNRKDKTLWTDNKQGDKIHYYRANNANEEAYYVVKKIQEQIRNNGRHYGDFAILYRTNA
QSRIIEETFVKTNIPYKLVGAHKFYDRKEIMDTLAYLRLVTNPADSMSFERIVNEPKRSI
GSVTVGKLRTFSQIHGMSMLEASKSAALAGVSAKASNELEKFAEMIEQLHEYQKAHNVTE
VTERILDVTGYKANLQREDTLENRNRLENLEEFLTVTKQFDQDWEPEDEESDPFVDFLAD
LALVSDQDSVEEEPDEVTLMTLHAAKGLEFPVVFLMGLEEGIFPLSRAVMDENELEEERR
LAYVGITRAEEELYLTNSISRMLYGKSQNNPASRFIEEIDEELIQSDNQTVASTTLTSKR
TRSREVPFSKKPKYRMPAGTVERPKETGADKQSWNIGDKISHKAWGTGTIVKVSGDGEDT
ELDIAFEGKGIKRLLAAFAPITKI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaatatgtttttgtcaggaatgaatgataaacaatcagaagcagttttatgt
acagaaggaccattattaataatggcaggagctggtagtgggaagactcgtgtgttaact
caccgtgtagcatacttaattgaagaaaaaggtgtaaatccttggaacatactagctatc
acctttacaaacaaagcagctcgtgaaatgagagaacgtgtaaataatttaatgggtgaa
ggtgcagaagatatatgggtatctacattccatgctttatgtgtacgaattttacgaaga
gacgcagaaaaaataggctttaatagatcatttacaattgcaagtacaagtgagcaaaga
actttgatgaaacaggttcttaacgatttaaatatcgatactaaaaaatatgatccacgt
gcaatcttaagtgtaatttcaaatgccaaaaatgacctattagatcctaaagattatgcc
caacaagctaatggaccatttgaagaaattgtaagtaaagcatattttgaatatcaaaat
cagcttgcaaataaccaagcaatggattttgatgatttaatcatgcaaactattagatta
ttcaacgaatcatcagaaacattggaattttatcaacgtaaattccactatattcatgtt
gatgaatatcaagatactaacgaagctcaatatgaattagttaataagttagctcgtaaa
tatcgcaatttatgtgttgtaggtgatgcagatcaaagtatttatggttggcgtggtgca
aacatggaaaatatcatgaactttgaagaagattatccagatgcaacagtaattaaattg
gaacaaaattatcgttctacaaaaaatattttagcagctgctaataatgtgattgagaat
aacgtaaatcgtaaagataagactttatggacagataataagcaaggtgacaagatccat
tattatcgtgcaaataacgctaatgaagaagcttattatgtagttaaaaaaattcaagaa
caaattagaaataatggacgtcattatggagattttgctattttatatcgtactaatgca
cagtcacgtataatcgaagaaactttcgtgaaaaccaatataccatataaattagttgga
gcgcataaattctatgatcgcaaggaaataatggacactttagcttatttacgtttagta
actaatccagctgattctatgagttttgaaagaatagtaaatgaaccaaaacgtagtatc
ggctcagtaactgttggaaaattaagaacattctctcaaattcatggtatgtcaatgtta
gaagcttccaagagtgctgctttagcaggggtatctgccaaggcaagtaatgaattagaa
aagtttgctgagatgatagaacagttacatgaatatcaaaaggcacataatgttactgaa
gttacagaaagaattctagatgtaacgggttataaagctaacttacaaagagaagatact
ttagaaaaccgtaatcgtttagaaaacttggaagaatttttaacggttactaagcaattt
gatcaagattgggaacctgaagatgaagaaagtgatccatttgttgatttcttagctgat
ttagctttagtttcagatcaagatagtgtagaagaagaaccagatgaagtcacattaatg
acattacatgcagcaaaagggctagaattcccagttgtatttttgatgggattagaagaa
ggtattttcccactttctagagcagttatggatgaaaatgaacttgaagaagaacgcaga
ctggcttatgtaggaataactcgtgctgaagaagaactttatttaactaactctatttct
cgtatgttgtatggtaagagtcaaaataatccagcttctcgttttattgaagaaattgat
gaagaattaatccaatcagataatcaaacggtagcaagtacaacattaacatccaagaga
actagatctagagaagtgccatttagtaagaagcctaaatatcgtatgccagcaggaact
gttgaacgccctaaagaaactggtgctgacaaacaaagctggaatataggagataagatt
tctcataaagcttggggaacaggaacaattgttaaggtctcaggcgatggcgaagataca
gaactagatattgcttttgaaggcaaaggtattaaacgattactagcagcattcgcacca
attacaaagatataa
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