Ligilactobacillus salivarius UCC118: LSL_1570
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Entry
LSL_1570 CDS
T00337
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl00521
Streptomycin biosynthesis
lsl00523
Polyketide sugar unit biosynthesis
lsl00525
Acarbose and validamycin biosynthesis
lsl00541
Biosynthesis of various nucleotide sugars
lsl01100
Metabolic pathways
lsl01110
Biosynthesis of secondary metabolites
lsl01250
Biosynthesis of nucleotide sugars
Module
lsl_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LSL_1570 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LSL_1570 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LSL_1570 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LSL_1570 (rfbB)
00525 Acarbose and validamycin biosynthesis
LSL_1570 (rfbB)
Enzymes [BR:
lsl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LSL_1570 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
ABE00374
UniProt:
Q1WRV5
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All DBs
Position
complement(1654456..1655487)
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AA seq
343 aa
AA seq
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MFKNIIVTGGAGFIGSNFVHYVVNNHPEVHVTVLDKLTYAGNKENLAGLPQDRVELVVGD
ICDKELVDKLVQNADAVVHYAAESHNDNSLRNPDPFIQTNIVGTSVLIEACTKYDVRFHH
VSTDEVYGDLPLREDLPGHGEGRGEKFTPESPYKPSSPYSSSKASSDLLVRAWVRSFGLK
ATISNCSNNYGPYQHIEKFIPRQITNILSGIRPKLYGTGKNVRDWIHTNDHSSAVWKILN
EGKIGETYLIGADGEKNNKEVLELILKLMGQPADAYDQVKDRPGHDLRYAIDASKLRNEL
GWEPQYTNFEEGLKATIDWYTNHREWWQDQKAAVEAKYAKNGQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaatatcattgtaactggtggagctggattcatcggttcaaactttgtacat
tatgtagtcaataatcatcctgaagttcatgtgacagtattggataaactaacatatgct
ggaaataaagaaaatcttgctggcttaccacaagatcgtgtagagttagttgtcggggat
atttgtgataaggaattagtagataagttagttcaaaatgctgatgcggtggtacattat
gctgctgaaagtcataatgataactcacttagaaatcctgatccttttatccaaactaat
attgttgggacatcagttctaattgaagcatgtactaagtatgatgtacgtttccatcat
gtttctactgatgaagtttatggtgacttgccattacgtgaagatttaccaggacatggt
gaaggtcgaggtgaaaaattcacacctgaatctccatataaaccaagtagtccttactca
tcttcaaaggcaagttcagatttgttagttagagcatgggtgcgttcatttggattaaaa
gcaactatttccaattgctcaaataactatggtccttaccaacatattgaaaaattcatt
ccacgtcagataacaaatattttaagtggtattcgtccaaaattatatggaacaggtaag
aatgtacgtgactggatccatactaacgatcattcaagtgcagtttggaagattttgaat
gaaggtaagattggcgaaacatacttaatcggtgctgatggtgaaaagaacaataaagaa
gttctagaattaatcttgaaattaatgggacaaccagcagatgcttacgatcaagttaaa
gaccgtccaggacatgatttacgctatgctattgatgcaagtaaattacgcaacgaatta
ggttgggaacctcaatatactaactttgaagaaggcctaaaagcaacaattgattggtat
actaaccatcgtgaatggtggcaagatcaaaaggctgcagttgaagctaaatacgctaaa
aatgggcaataa
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