Ligilactobacillus salivarius UCC118: LSL_1571
Help
Entry
LSL_1571 CDS
T00337
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl00521
Streptomycin biosynthesis
lsl00523
Polyketide sugar unit biosynthesis
lsl00541
Biosynthesis of various nucleotide sugars
lsl01100
Metabolic pathways
lsl01110
Biosynthesis of secondary metabolites
lsl01250
Biosynthesis of nucleotide sugars
Module
lsl_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LSL_1571 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LSL_1571 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LSL_1571 (rfbC)
Enzymes [BR:
lsl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LSL_1571 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF2785
Motif
Other DBs
NCBI-ProteinID:
ABE00375
UniProt:
Q1WRV4
LinkDB
All DBs
Position
complement(1655499..1656080)
Genome browser
AA seq
193 aa
AA seq
DB search
MGKLIVKETKLQDVKLITPAVFGDNRGFFTESYSDRDFKAAGIDFDFIQDNHSLSTQAGV
LRGLHFQRGKAAQTKLIRVATGAVLDVIVDLRKGSPTYKQWEGYILSESNHRQLLVPKGY
AHGFVTLTDNVNFLYKCDNYYDAEADGGISFKTPELNIDWPIDLDKAITSEKDANQPTLT
EFEKGNPFVYGEI
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaattaattgtaaaagaaacaaaattacaagatgttaaattaattacaccagca
gtatttggagataaccgtggttttttcacagaaagttattcagatcgtgatttcaaagca
gctggaattgattttgattttattcaagataatcactctctttctactcaagcaggtgtt
ttacgtggcttgcattttcaacgtggtaaagctgcacaaacaaagttgattcgagtagca
actggggcagttttagatgtaatcgttgatttacgtaagggatctcctacatataagcaa
tgggaaggatacatcttatctgaaagtaatcatcgtcaattgttagtacctaagggctat
gctcatggatttgttactttgacagacaacgttaacttcctttacaaatgtgataattac
tatgatgcagaagctgatggtggtatctccttcaagactcctgaacttaatattgattgg
ccaatcgatttagataaggcaatcacatctgaaaaagatgctaaccaacctactttaaca
gaatttgaaaaaggcaatccatttgtctatggcgaaatttag
DBGET
integrated database retrieval system
