Ligilactobacillus salivarius UCC118: LSL_1607
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Entry
LSL_1607 CDS
T00337
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_1607
Enzymes [BR:
lsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSL_1607
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LSL_1607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_30
DUF2059
LPD18
DUF433
Motif
Other DBs
NCBI-ProteinID:
ABE00409
UniProt:
Q1WRS0
LinkDB
All DBs
Position
complement(1687868..1691614)
Genome browser
AA seq
1248 aa
AA seq
DB search
MANGFKFTPAQQKAIEDTGKNILVAASAGSGKTRVLVERVINKIKQGVSIDELLVVTFTE
AAAKEMKERIQIALRKELSTADSEEEKRRYLTQLSKLNVANISTLHAFCLQIIKQYYYVI
NLDPMFRMLTEDTEVALLQENVWDDLREKWYSKKSPEFENLVVNFSSDRNDDGLSELVMK
TYQFANANPNPDEWLNNLVSEYDLGDQPLMESNFYQNKIKPNVLDQIQLAKDNLKQGMDE
ANKLGLEKLYQTFEQDCATIDELQDFVVGCKEWNNLKTTLQNFKFKRAKSDRGLDDDQKK
QKERINKTLRDGSKKIIEDLSVKYFALPEDEIKELTQKSKQIVETLSEVVKEFGAEFSKE
KRRRHVLDFSDLEHLTLQILNTDTPDGRRVKERLKNKFKEIMVDEYQDTNQLQETILTTI
AHKNPGNMFMVGDVKQSIYGFRLADPGLFLKKYQSFATDDNDDERIILAENFRSMENVTA
FTNLIFSQLMDEKVGEMAYDEDARLVYGAKYYPEETPIKAEVLVYESEDSSQESDDEPVN
EDFSIDNKAQGQIVMTAKRIKELVENGEKIYDKKQGTIRPIEYRDIAILAPTRKNNLILT
EEFKRLGVPIFVPDAQNYFQTTELKIMMSFLQIIDNPYQDIPLVAVLRSPIVGLKENELA
YLRINDKTGDYFQAVESFYDNFEVEKASAFAQSLYEKIAIFLKQLTEFRNMAQQNELASL
IWKIYEETGFLDYVGGMPGGLQRQANLHALYERAAEYEEMSFKGLFQFVRFINKMQTKNK
DLSEATTQVSDDAVTVMTIHGSKGLEFPVVFLLDATHKFNVGDLNKPYLLNADDGIGISY
LDPDTRVKTDTLMKVIAGKQALKKLAAEQMRLLYVALTRAEQQLFIVGSYKDKNEALSKW
KKATQSESLVLNAGIRASVRNFMDWIGMCLTRSEIFKEVDDTVDAKEPEYIGELPVKFEV
KFYSNQDLRGENITLDENSESWLKQQLKKIEEQEPLEINDKQYRIIDKILQSKYPNESLA
KTTAYQAVSDLKRAFDDPDNNMMQSLEIDWQDQVPQGINRYVQNELSLPKFMTTKVKVSP
AQVGIATHLLLQKLPLDDEVTLEELMQLLAQLVEDKLITSEVAKEINLNQIKVFYTSDLG
RKVLKNKDKVKRELPFAMIIPAGRLFSNVDNDVEQPILVHGIIDGLIELDDEVIIFDYKT
DHHTSEDKLIENYRGQLNLYAMAVESMLNKKVSQKIIYSLDLGKSIVL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggatttaagtttacacctgctcaacagaaagcaattgaagatacagggaaa
aacattttagtagctgcttcagctggatctggtaaaacaagagtcttggttgaacgtgtt
attaataagatcaaacaaggagtaagcattgatgaattactagtagtaacttttacggaa
gctgcagctaaggaaatgaaagagagaattcaaattgctttgcgtaaggaattatcaacg
gctgactctgaagaagaaaagcgtagatatctaacgcaattatcaaaattaaatgtagct
aatatctcaacactacacgcattttgtttgcagataattaagcaatattattatgtaatc
aatttagacccaatgtttagaatgttaacagaagatactgaagttgctttactacaagaa
aatgtatgggatgatttgcgtgaaaaatggtatagcaaaaaaagtccagaatttgaaaat
ttagtagttaatttttctagcgaccgtaacgatgatgggttaagtgaattagtaatgaaa
acttatcaattcgctaatgccaaccctaatccagatgaatggctaaataacttagtaagt
gaatatgatttaggtgatcaacctttgatggaaagtaatttctatcaaaataagataaag
cctaatgttttggatcaaattcaattagcgaaagacaatctaaaacaaggaatggatgaa
gctaataagctaggattagaaaaactctatcaaacttttgaacaagattgcgcaacaatt
gatgagttacaagattttgtagttggatgtaaggaatggaataatttaaagacaacttta
caaaacttcaagttcaaacgcgctaaatctgatagaggcttggatgatgatcagaaaaag
caaaaagaaagaattaacaagactttgcgcgatggtagtaaaaagatcatagaagatcta
agtgttaaatattttgctttacctgaagatgagatcaaagagttaacccaaaaatccaaa
caaattgttgaaactttaagtgaagttgtaaaagaatttggagcagaattcagtaaagaa
aaacgcagaagacatgtacttgattttagtgacttggaacacttaacgctacaaatctta
aatactgatactcctgatggtagacgagttaaggaaagattgaaaaataaatttaaagaa
atcatggttgatgagtatcaagatactaaccaacttcaagaaacaattttaacaacgatt
gctcataagaatccaggcaacatgttcatggtaggggacgtaaagcaatctatctatggt
ttccgtttggcagatccaggattatttttaaagaagtatcagagttttgcaactgatgat
aatgatgatgaaagaatcattcttgccgaaaacttccggtcaatggaaaatgtaacagca
tttactaacttaatattctctcaattgatggatgaaaaagtgggagaaatggcgtatgac
gaggatgctcgcctagtttatggggcaaaatattatccagaagaaactcctataaaagct
gaagttttagtatatgaaagtgaagattctagtcaagaaagcgatgatgaacctgtaaat
gaagatttttcaattgataataaagctcaaggccaaattgtcatgactgccaagagaatt
aaagaattagttgaaaatggtgaaaaaatctatgataagaaacaaggaactattaggcca
atcgaatatcgagatattgcaattttagctccaactcgtaagaataacttgatcttgaca
gaagaatttaaacgtctaggagtaccaatttttgttcctgatgcacaaaattatttccaa
acaactgaattaaaaataatgatgtcattcttacaaataattgataatccttaccaagat
attcctttagtggcagtgttacgttcaccgattgttggactaaaagaaaatgaactagct
tatcttagaattaatgataaaactggtgattatttccaagcagtagagagtttctacgac
aattttgaagttgagaaagcttcagcatttgctcaaagtttatatgaaaagatagcaatt
ttcttgaagcaattaactgaatttagaaatatggctcaacaaaatgagttagcaagttta
atttggaaaatatatgaagaaactggttttcttgattatgttggaggaatgccaggtgga
ttgcaacgtcaagctaacttacatgctttatatgaaagagctgcagaatatgaagaaatg
agttttaaaggtttattccaatttgtgcgtttcatcaataagatgcagactaaaaacaaa
gatttgtcagaagctacaacgcaagtttctgatgatgcagttacagttatgactattcat
ggtagtaaaggattggaatttccagttgttttcttattggatgctactcacaaatttaat
gtgggagatttgaataaaccatatttgttgaatgcagatgatgggataggaatttcttat
cttgatcccgatactcgagtaaagacagacactttgatgaaagtaattgctggtaaacaa
gcgttgaaaaaattagcagctgaacaaatgagattgctatatgtagccttaacccgagca
gaacagcaattatttatcgttggttcatataaagataaaaatgaagctttgagtaagtgg
aagaaagctacgcaaagtgagtccttagttttgaatgcaggtattagagcatcagttaga
aactttatggactggattggtatgtgtctaacaagaagtgagatctttaaagaagttgat
gatacagtagatgcaaaagaaccggaatatataggtgaattaccagtaaaatttgaagtt
aaattttatagtaatcaagatctacgtggagaaaatattactttagatgagaatagtgaa
tcttggttaaaacaacagcttaagaagatagaggagcaagaacctttagaaattaatgac
aagcaatatagaattattgataaaattctacaaagtaagtatcctaatgaatcattagct
aaaacgactgcttaccaagctgtgtcagacttaaaacgagcttttgatgatccagataat
aatatgatgcaaagcctggaaattgattggcaagatcaagtacctcaaggcataaataga
tatgtgcaaaatgagttgagtttacctaagtttatgacgacaaaagtaaaggtatctcct
gcacaagtaggtattgcaacacatctactgttacaaaaattaccacttgatgatgaggta
acgcttgaagaattaatgcaattactagcacagttggtagaagataaattaataacatca
gaagtagctaaggaaattaatttaaatcaaattaaggtgttttatactagtgatctaggt
agaaaagttctaaagaataaagataaagtaaaacgagaattaccatttgcgatgattata
cctgctgggagattatttagtaatgtggataatgatgtagagcagccaatcttagttcat
ggtattatcgacggattaattgagttagatgatgaagttattatctttgattataagact
gaccaccatacttccgaagataagttgattgaaaattaccgtggacaattaaacttatat
gcaatggcggttgaaagcatgttgaataagaaagtttcacaaaaaattatatattcttta
gatctaggaaaaagcattgttctttaa
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