Ligilactobacillus salivarius UCC118: LSL_1608
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Entry
LSL_1608 CDS
T00337
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lsl
Ligilactobacillus salivarius UCC118
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsl03400
]
LSL_1608
Enzymes [BR:
lsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSL_1608
DNA repair and recombination proteins [BR:
lsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LSL_1608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ABE00410
UniProt:
Q1WRR9
LinkDB
All DBs
Position
complement(1691619..1695200)
Genome browser
AA seq
1193 aa
AA seq
DB search
MSLGFVLGDATKNHRQVLLEQITNWQAEDPQAKIYYIVPNHNKFSAEVKVLDYLKSQQDN
QDLFATSNVQTFSFTRLAWYFMKDTATYQVNRITNAGLNMIVYRSLQEHSDELTIFKGEQ
TQPGFIAQLVSQLIELQQSCITYDDIERMKENLSQQDTADSAELEAKLHDIAIIYRDFMQ
MTDSKYLKPADILPSLTQYLQNEDLSNSYFIIEGFSQFTAQEQAIISVLLQRAKEVRIDL
ILNRGVTDIEDLSDKQSLFYRSERTYYLLYQQARKAQVKILNDVYPQELRVETPELQSLA
KYWKESTDLKPINVEKIGDNHNLQVIKADTRMTEIKEIATRIKQMVALKDYRYADFLLLT
PDLNKYRNIIEPIFNDYKVPIFVDLAKKMIDHPLVELLTALFNVKARHYRYVDMMRLLKT
ELLIPKTEYGYLGIKQFRQDLDLTENLILKFGFEGSQWLRKDDWVYYRFGSSDFGTQTDV
QEKITKQVNVIRRYIKEILPPFFKQLDEAENGKEAAQILMNFLIINGVPEQLINWRNKAL
EQGDMVMADRPEQVWNLFCALMDEYVDTLGDLSFKEEDFLNLLQTGFEGATYRQVPSTLD
QVIISETTATQMNDRKVTFIFGATDLVMPNRIQNTMLLTDMDRELVQGTLDDEKYLSDTA
EGRMAAEPFMNYLAFMTPKERLYFSYPVAGVNEDGLRMSPYVNRIMKQFDLPLYEANGEP
TLEDKKVLKFVATKRTALSNLIGVARQAKGQKQPLPVMWRYIYQKLQEDATYRRLTRKLM
AGIEYSNIPERLKTEYAEKLYGKTLNTSVSKFEEFFKNHYAFFLKYGLKLKERDVFELSP
ANTGEFYHMALDKLLKTLKQDKVSITDINKSQFDAYLQQVLGGMEQLPQFQILQSSNRMQ
FILKQLGATVSQMGWALHNQGQRTKMRPLETEVLFGHVGTENGLKALTYDLGNGHKVNVR
GKIDRIDQMIIDNQRYLGIVDYKSSSHKFNYQDAYYGLALQMLTYLNAMLQNTDLLLDLN
AGEEIKPAGAVYMHLQNPVIKQKDILKNPYSEVLLKQNKYDGLVLDDQELLSNLDTSIEK
AGNSIVYPVRKYADGHFGGIKNSGNVITFDNLMLLLKRNEELIQEAAKLIFAGDVALNPV
LWPDRRSALQYSPYKAIMQFDELLGNQYYRLPKENTADILQKLAQENSAESEV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaggatttgttttaggtgatgctactaaaaatcatcgtcaagtattgctagag
cagataactaactggcaagcagaagatccacaagccaagatttactacatagttcctaac
cataataaatttagtgctgaagtaaaagtattagactatttaaaaagccagcaagataat
caagacttgtttgcgacaagtaacgtacagactttctcatttacacgtttagcttggtat
ttcatgaaagatacggctacatatcaagttaatagaataactaatgctggtttgaatatg
attgtttatcgtagtttgcaggaacatagtgatgaattgacaatttttaaaggtgaacag
acacaaccgggctttattgctcaattggtatcacaactgatagaactacaacaatcttgc
attacatatgatgatatagaaagaatgaaagaaaatttaagccaacaagatacagctgat
agtgcagagttggaagctaaattacacgacatagcaattatctatcgtgattttatgcag
atgacagacagtaagtatttaaaacctgctgatattttgccaagtttgactcagtactta
caaaatgaagatctaagcaatagttactttattatcgaaggattttcacaatttacagct
caagaacaagctataatttcagtcttgcttcaacgagctaaagaagtgagaattgatttg
attttgaatcgtggagtgactgatattgaagatttaagtgataagcagtcattattttac
cgatctgagagaacttactatttactttatcaacaggctagaaaagcacaggtcaaaatt
ctgaatgatgtttatccacaggaattacgtgtggaaactcctgaattacaatccttggct
aagtattggaaagaatccacagatttgaaaccaattaatgttgaaaaaattggggataat
cataatttacaagtcataaaagctgatacaagaatgacggaaataaaggaaatagccaca
agaataaagcaaatggtcgctttgaaagactatcgttatgcagatttcttgctattgacg
ccggatttgaataagtatcgaaatatcattgaacctatttttaatgactataaggttcca
atctttgtggatttagctaagaagatgattgatcatccacttgtggaattgttgacagcc
ttattcaacgtcaaagcacgtcattatcgttatgtggatatgatgcggcttttaaaaact
gaattgttaattcccaaaacagaatatggttatttgggaattaaacaatttagacaagat
ctagatctaactgaaaacttgatcttaaaatttggttttgaaggaagtcaatggctacgt
aaagatgattgggtatattatcgctttggaagttctgactttggtactcaaactgatgtc
caagagaaaataactaagcaagttaacgttattcgtcgttatattaaggaaattttacca
ccattcttcaaacaattagatgaagccgaaaatggtaaagaagcggcacaaatcttgatg
aactttttgattattaatggtgttccagaacagttgattaattggagaaacaaagcacta
gaacaaggtgatatggtgatggcagatcgtcctgaacaagtgtggaacctattttgtgca
ttaatggatgaatatgtagatactttaggagatctatcatttaaggaagaagatttcttg
aacttactacaaacaggatttgaaggagctacttatcgccaagttccatcaacacttgat
caagttattatttctgaaacaactgcgacacaaatgaatgatagaaaagtaacatttatc
tttggtgctacggacttagtaatgccaaatcgcattcaaaatacgatgttactgacagat
atggatagagaattagttcaaggaacactagatgatgagaaatatttatctgacactgct
gaagggcgaatggcagcagaaccatttatgaactatctagcattcatgacgcctaaggaa
agattgtacttctcttatccagttgctggagttaatgaagatggactaagaatgtctcca
tatgtaaatcgcatcatgaaacaatttgatttaccactgtatgaagctaatggtgaacca
acactagaagataaaaaagtcttgaaatttgtagcaactaagcggacagctttgagcaat
ttaattggagtagctcgtcaggctaagggtcaaaaacaacctttacctgtaatgtggagg
tatatctatcagaagttacaagaagatgctacttatcgcagacttacacgtaaattgatg
gctgggatcgaatatagtaacattcctgaaagattgaagacagaatacgcagaaaaattg
tatggtaaaactttgaatacctcagtatctaaatttgaggaattcttcaaaaatcactat
gcctttttcttaaaatatgggttgaaattaaaagaacgtgacgtatttgaattatcacca
gctaatacaggtgaattctatcatatggccttagataaactattgaagactcttaaacaa
gataaagtctcaattactgatataaataagtctcagtttgacgcatatcttcaacaagtt
ctaggtggcatggaacaattgccacaatttcaaattttacaaagttcgaacagaatgcaa
tttatcttgaagcaacttggagctactgtaagtcaaatgggatgggctttacataaccaa
ggtcaaagaactaaaatgcgtcctttagaaactgaagtattgtttggacatgtaggaact
gaaaatggtttgaaggctttgacttatgatttaggtaatggtcataaggttaatgtccgt
ggaaagattgaccgaattgatcagatgattatagacaaccaacgttatttagggattgtt
gactataaatcaagtagtcataagtttaactatcaagatgcctactatggactggcatta
cagatgttgacatatttaaatgccatgttacaaaatacagatttattgcttgatttaaat
gccggagaagagattaaaccagctggggcagtttatatgcacttgcaaaatccagttatc
aagcaaaaggatattttgaaaaatccatatagcgaagtattgttgaaacaaaataaatac
gatggcttagttttagatgatcaagagttattaagtaatttagatacatcaattgaaaaa
gctggtaattctatcgtatatcctgttagaaaatatgcagatggtcattttggagggatt
aagaatagcggtaatgtaatcacatttgataatttaatgttacttctaaaacgaaatgaa
gaactaattcaagaagctgcaaaacttatttttgctggtgatgtggcattaaatccagtt
ctatggccagatagacgatcagcattacaatactcaccatataaggcgattatgcaattt
gatgaacttttaggaaatcaatattatcgtttaccaaaagaaaataccgctgatattctc
caaaaattagcacaagaaaattcagcagaaagtgaggtttaa
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