Ligilactobacillus salivarius UCC118: LSL_1910
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Entry
LSL_1910 CDS
T00337
Symbol
abpT
Name
(GenBank) AbpT bacteriocin export accessory protein
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
lsl
Ligilactobacillus salivarius UCC118
Pathway
lsl02010
ABC transporters
lsl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lsl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LSL_1910 (abpT)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LSL_1910 (abpT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsl01002
]
LSL_1910 (abpT)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsl02000
]
LSL_1910 (abpT)
Peptidases and inhibitors [BR:
lsl01002
]
Cysteine peptidases
Family C39
LSL_1910 (abpT)
Transporters [BR:
lsl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LSL_1910 (abpT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
Peptidase_C39_2
AAA_29
ABC_ATPase
nSTAND6
nSTAND3
NB-ARC
RsgA_GTPase
DUF87
AAA_22
SMC_N
nSTAND1
AAA_18
MobB
AAA_16
Mg_chelatase
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ABE00714
UniProt:
Q1WQY4
LinkDB
All DBs
Position
pMP118:complement(200809..202968)
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AA seq
719 aa
AA seq
DB search
MLRKYRKDYVSQVDESDCGVASLAMILKHYGSALSLAYLRNIAKTTMEGTTALGLVKTAQ
ALGMETQAVKADMSLFGMKDITYPFIVHVVKEETLLHYYVVLKATPRYILIADPAPDVGI
TKMSYERFEKEWTGITLFIVPGIEYKPTKETRQSLISLFSKLFKQKQLIVNIVLAALLIT
IISILGSYFLQGIIDTYIPNGMHSTLAIIALGLLVIYVFNSIFTYARDFLLAILGQRLSI
EIILSYIRHIFELPMEFFATRKTGEIVSRFNDASKIIDALASTVVSIFLDVSIVVIMGII
LAIQNLKLLGITLITLPIYTIIILTFTKAFERLNNKQMESNAILSSSIIEDIQGIETIKA
LNSEQMRYRKIDSQFVDYLRKSLAYIKTDSLQQALKLFIQQTLNVIVLWLGANLVISNQL
SIGQLMTFNALLSYFVNPLQNIINLQPKLQSARVAHNRLNEVYLVESEFKDRKAVHDVTQ
LQGDIIFKDVDYHYGYGENVLDKVNLTLKQGEKLTIVGMSGSGKSTLVKLLVNFFAPVSG
SIKLNNHDINNIDKHALRSYINYIPQNPYIFTGTIEDNLRLGNRSNVTDEDILMACKIAM
IDIDIAKMPLQLKTELDENANILSGGQKQRITIARALLSPAQVLIFDESTSGLDAITEKK
LIDNLMKLKSKTIIFIAHRLSIAKRTNNILVLDSGKIVEKGRHDELLAKKGYYYNLVNS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgttaagaaagtatcgaaaagattacgtttcacaagtagacgaatctgattgtggcgtg
gcttcgttggctatgattttgaaacactatggatcagcactatcattagcgtatttaagg
aacattgctaagacaacaatggaggggactacagctttaggtcttgttaagacagcacag
gctttaggaatggaaacacaagccgtaaaagctgatatgtctctttttggaatgaaagac
attacatatccatttattgtacatgtggttaaagaagagacgttattacattattatgta
gtattgaaagcaacgcctagatatattttaattgctgatccagctccagatgtagggata
actaaaatgtcgtatgaacgttttgaaaaagaatggacagggattactttattcatcgtt
ccaggaattgaatacaagccgacaaaagagactagacaatcattaatatcactatttagt
aaattatttaagcaaaagcaactaatagttaatattgtattggcagctttgttaattaca
attattagtatattgggatcatattttttacagggaataattgatacatatattcctaat
ggtatgcatagtacactggcaattattgctttgggattactagtaatatatgtgttcaat
tcaatttttacatatgcaagggattttttattagcaattttaggacaacgactttcgatt
gaaattattttaagttatattagacatatttttgagttgcctatggaattttttgcgacc
agaaaaactggggaaatagtttctcgtttcaatgatgctagtaaaattatagatgcttta
gcaagtactgtggtatctatttttttagatgtaagtattgtagttattatgggaataatc
ttggctattcaaaatcttaaattactaggaataactcttatcacacttccaatttacacg
attattattcttacatttacaaaggcatttgaaagattgaataataaacaaatggaaagt
aatgcgatacttagttcatctattattgaagatattcaaggaatagaaacaataaaagcc
ttaaacagcgaacaaatgcgttaccgcaaaattgatagtcaatttgtggactatttgcgt
aaatcgttagcatatataaaaacagactcgttgcaacaagcattaaagttatttattcaa
caaacattaaatgttatagtcctatggttaggggcaaatctggtaattagtaatcaactc
tctataggacaattaatgacttttaacgcactattaagttattttgtgaatccattacaa
aatatcataaatttacagccaaaattgcagagtgcaagggtagctcacaatcgtttgaat
gaggtttacttggttgaaagtgaatttaaagatagaaaggctgttcatgatgttactcaa
cttcaaggagacattatatttaaagatgttgattatcactatggttatggtgaaaatgtt
ttggataaggttaatttgactttaaaacagggagaaaaactaactatagtaggtatgagt
ggctctggcaaatcaacgttagttaaactattggtgaatttttttgctccagtttcaggg
agtataaaactaaataatcatgatattaataatattgataagcatgcactgcgttcctat
attaattatataccacagaatccatatatttttaccgggacaatagaagataatcttaga
ctaggtaatcgatctaatgtgactgatgaggatattcttatggcttgtaaaatagcaatg
attgatatagatatagcgaagatgccactacaattaaaaactgaattagatgaaaatgct
aatattttatcaggtggacaaaaacaaagaattacaattgctagagccttattatctcca
gcacaagtattgatttttgatgaatctacaagtgggttagatgctattacggagaaaaaa
ctaattgataatttaatgaaattaaagtcaaaaactataatttttattgcacatagatta
tctatagctaagcgaacaaataatattctagtattagatagcggaaaaattgtagaaaag
ggtagacatgatgaattattagctaaaaaaggatactactacaatttagttaatagttag
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