Lepeophtheirus salmonis (salmon louse): 121113697
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Entry
121113697 CDS
T08214
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121113697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121113697
Spliceosome [BR:
lsm03041
]
Common components
Common spliceosomal components
SR proteins
121113697
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
SET_assoc
Motif
Other DBs
NCBI-GeneID:
121113697
NCBI-ProteinID:
XP_040563477
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All DBs
Position
2:29727254..29731464
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AA seq
328 aa
AA seq
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MDLYSSHKKPDKMSTRVYMGGLSHRVRERDVEKLIRKYGKVREVSLKNGYGFVEFDDYRD
ADDACYDLNGKEFMGERVTVELARGTPHGRDRERWGTGSTGRRERSPKRRRDSKSSSRPG
WLDKYGPPTRTDFRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKNRRNEGCVEFANED
DLKTAMEKLDGTELNGRKIKLVPDRKRKRSHSRSRSRSRSRSRSKTRGRKSRSRGSTRSR
DRMSKSVSRSKSRSKSKSRSRSRSRSRSKSVDDSKENGRSSRRRRSRSRSSSRNGDNSPK
EEHGNNGDDRKSDNDEESTNHKTSVENE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatttatattcttctcataaaaaacctgataaaatgtcgacgagagtctacatgggt
ggcttgagtcaccgtgtcagggaacgcgacgtggagaagctcattcggaaatacggaaag
gtgagagaggtctcgttgaaaaatggatacggatttgtggagtttgacgattatagggac
gcggatgatgcgtgctatgatctcaatggaaaggaattcatgggagaaagggttactgta
gaacttgcccggggtactcctcatggtcgtgatcgtgagcgctggggtacaggaagtact
ggacgccgtgaaagaagtcctaagcgacgccgtgactcgaaatccagcagtaggccagga
tggctggacaaatatggtccccctactcgaaccgatttccgtcttgttgttgaaaatttg
tcaagcagagttagctggcaggatctgaaggactatatgcgtcaagcaggagaagttaca
tatgctgatgcgcataaaaatagaagaaatgagggttgtgtcgaatttgctaatgaagat
gacttaaagacagctatggaaaaacttgatggaacggaactgaatggtcgcaaaatcaag
cttgtccccgatcgtaaaagaaagagatctcattctaggtctaggtcaagatcgcgctct
agatctagatcaaaaactagaggaaggaagagtaggagtcgtggaagtacaagatcaagg
gatagaatgtcaaaatctgtttctagatcaaaatctcgatcaaaatccaagtcaagatca
aggtctagatcacgatctaggtctaaatcagtggatgattcaaaagagaatggaagaagc
tcccgacgacgtagatctagaagtagatcaagttcaaggaatggtgataattcgcccaag
gaagaacatggaaataatggcgatgatcgtaaatctgataacgacgaggagtcgactaat
cataagacttctgttgagaacgaataa
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