Lepeophtheirus salmonis (salmon louse): 121113781
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Entry
121113781 CDS
T08214
Symbol
Nup98-96
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121113781 (Nup98-96)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsm03019
]
121113781 (Nup98-96)
03036 Chromosome and associated proteins [BR:
lsm03036
]
121113781 (Nup98-96)
Messenger RNA biogenesis [BR:
lsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121113781 (Nup98-96)
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121113781 (Nup98-96)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
121113781
NCBI-ProteinID:
XP_040563577
LinkDB
All DBs
Position
2:38205144..38211824
Genome browser
AA seq
1909 aa
AA seq
DB search
MFGNKSAFGTTNTGGGFGGFGSTSTGGGGGAFGGTSAFGQNTAASTPSFGGFGATTTTSG
SGLFNNPSSGAAGGLFGQTAPNPGTSTFGGFGASNSGSTFGNSFTKPAGFGTTFGAATTS
TGAAGGLFSSSTTNNAGGSLFGSSFGAAPATSNASSFSSFGASSFGAPQQQQQAGTTVKF
NPPSGTDTMLKSGITHNISTRHQCISCMKDYEAKSLEELRFEDYAAGRKGAAGGAAPAMG
LFGQQQQPQQQPQQNATPLFGSQATTQNSLFGQQQQQQQQQTQQQQQNKPLFGSTNTAGF
GANNTFGASNTFGQTNATAAGGLFKPPNAFGSTTSASTGFGFNTTTSTSGGTLFGQQNKP
AFGQPAQGGGLFSNTAGGFGTPAVVSTAPAFGQTTTAPFGQPLQQQQQQTGMFGQMGVKP
AGFGTPSTGFGAAGTASSGFGGFGATSTPSTAFGQGAKPAFGFGATATPVASSATAPAFG
FGAATSAATGGGLFSQKPGGGSTFSFGAGQPTTTGFGAGTNAFGSSAGGLFGNTQNKPGG
LFGSTPSVGTGTAFGATSGFGGTSSFNLGGAPGTAFGGLGTNPGVGGMQPFGANMANGGV
GAGMNQAPSNIIHQSLASLSANPYGENSLFKTMLQTSGKREEIIKPSNPSTQKTINSESA
HHKLSPHRNVKAKAKPLLGSGNKSSMFDGLEDDDINPKNEIFVPRASVKKLVLKPKNASL
NTPQHSNIAASTNDGGEDENGLSLTMPLSKSSQEASFAMSPIVSNSNNVSIVDESFTALN
TRNKNRKNLDASVFEDVAGNSVPTSVTTDDEGFARDGSPQGQDSSPHPAGIVLNRNGYYT
IPAMSELGSLVDGDGNCFIEGFTIGRNGYGNIYFPGVMNIVGLNFDEIVFIRHKEVTVYP
DDEKKPALGDGLNRKAQVTLDKVWPIDKAKRQPISDPNRLLAMNYEDRLEKASIKLDARF
VEYRPETGSWVFKVDHFSKYGLDDSDEEDNAPPLIVKTSIDPNKKLKTLQLELRDQGSNL
NTNGNNKMVANLNEANLIRNNELSIDEEIMKRHTSTSILEDGLNISKNNGVSPNHKDGLV
SPMSQQLVTINAQNDKVQMMKASLFDEDDEEDIDTEMMPLETANESLQPKSRPIILEQRT
PSEVAPPLSHSMIARGLGGSFSMDQSGHNLSSSLLRNQILSQLASKKEVIPTKSSSTNNK
NASLNYSLTKGYDNFVTLPSSGSSDRCKTIVPKFYNKVPLSDSLLLEKYFIADTGSFMNR
SFRCGWGPEWKIVNCGSSLDSIQASLDSVHAPFDVTVERFGNLFKRNEEVIKCLESWLST
SLENSEIFYGENGIPFFTSVDGVDTLNSYVKEANAQFDSYDSASSEFAKELKQAKEVWSL
CEALWGDLDENMNELDSDSHKITMQRRQALSRWLELAISSEKKDLLEDKMDTCTKDTSSM
GRILNLLTANKIIEACDQCHEDGNHFSALLMSQFGGGVAGSLVFNQMDRWQEAHTDRFIE
KDMLRFFALVAGNPYWPASDGKTINTCEDLDWKCAFSYHLWYLCSPVASISDALTLYINA
FEGHTEFGVYASAPFPQYSGVDDGSAYDIAYHLLRLYCDRSHSLESLLSPITHSKDPLDF
RLSWFINQALISLGYKHLNTIRQDDLTASFASQLENLSLWEWSVFVLLHLSHGPKRESLI
KDVICRGIRSCKDLDSKEEFLKEKLSIPTEWIADGKANWAAANCQFMDQSWYLLKAKRWN
LAHEVLIKRIAPDAIINEDYDFLYKVLDELAENDPDTHVTGWGLSGQIFFDFINVDRDVN
ILKEKRDDSSITFFIEKLKPKVISLCSRISKLRTETAKERLCQSEIAKRMAYLMRAVLTA
DFSNGGETSKAMASRILAETLTQLPLPDDYALHELRNLTKNYMLEIMEH
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaataaatcagcttttggtacgacgaacacgggtgggggattcggtggattt
gggtctacatccacaggcggcggcggcggtgcgttcggtgggacttctgccttcggccag
aatacggctgccagcacccccagcttcggtggttttggtgccacaacgacgacctctggg
tctggcctcttcaacaatccgagcagtggagcggctggcggccttttcggtcaaacggct
cccaatccaggaacgtccacttttggaggatttggagcttccaactctgggagcactttt
ggaaattcctttactaaacccgcgggatttggaacaacattcggtgctgcgacaacgtct
acaggagccgcaggaggactcttctcctcctccacgaccaacaatgctggaggaagtctc
tttgggtccagctttggagctgctcctgccacgtccaatgcttcctccttcagctccttt
ggcgcatcctcctttggagctccacaacagcaacaacaagccgggacgacagttaaattt
aatcctccctctggaacggataccatgttgaaatccgggataacgcataacatttccacg
cggcaccaatgcatctcctgtatgaaagactatgaagccaagtcattagaagaacttcgt
ttcgaggattatgctgctggtagaaagggtgctgctggaggagcagcccctgccatgggc
ttatttggacaacaacagcagcctcaacaacaacctcaacagaacgcgacccctctcttc
gggtctcaggctacgacgcaaaattccttatttggccaacagcagcagcagcagcaacaa
caaacacagcaacaacaacaaaataaacctctttttggatccactaacacagctggattt
ggtgcgaataatacgtttggagcctccaatacctttggacaaacaaatgcaaccgcagct
ggaggtttatttaagcctccaaatgccttcggctcaactacaagtgcatccacgggattt
ggattcaatacaacaacctcaacctccggcggcactctcttcggccaacaaaataagcca
gccttcggacaacctgcacaaggtggtggactatttagtaatacagcaggtggctttggt
actccagcagtggtatcaacggctccagcatttggtcaaacaacgactgcgccatttgga
cagcctcttcaacaacaacaacaacaaacgggcatgtttggacaaatgggagtgaaacca
gccggttttgggacacctagtacaggttttggcgctgcaggtactgcatcgtcgggtttt
gggggatttggagctacatctactccttctacggcatttggacaaggtgctaaacctgca
tttggttttggcgccacagcaactcctgtagcttcttcagctactgctccagcttttggc
tttggagcagctacttcagcagcaacaggtgggggtctttttagtcaaaagccaggtggt
ggctctacgttttctttcggagctggacaacctacaactactggtttcggtgctggtaca
aatgcattcggttcatctgctggaggactttttggaaatacacagaataaaccaggtggc
ctatttggatctactccttcggtcggaacaggtactgctttcggtgctacgtctggtttt
ggaggtacgtcatcttttaaccttggaggtgcccctggaactgcatttggtgggcttggg
acaaatcctggggttggtggtatgcagccttttggtgcgaatatggctaacggaggtgtt
ggagctggaatgaatcaggcaccatctaatatcatacatcagtcccttgcttccttaagt
gctaatccttatggggaaaattctctttttaaaacaatgttacaaacgagtggaaagcga
gaggaaattattaaaccatcgaatccatcaactcaaaagacaatcaattccgaaagtgca
catcacaaattatctccccatcgcaatgtgaaggccaaagctaagcctctcttagggagc
ggaaataaaagctccatgtttgacggattagaagatgatgacatcaatccaaaaaatgaa
atttttgtgcctagagcatctgttaagaaattagttttgaagcccaagaatgcatctctc
aatactcctcagcattctaatattgctgcaagtactaacgatggaggggaagatgagaac
ggcctttccttaacaatgcctctttctaaatcatcccaagaagcttcatttgccatgtct
ccaattgtttctaatagcaataatgtgtctattgtagacgaatcttttacggctctgaac
actcgaaataaaaatagaaaaaatttagatgctagcgtttttgaagatgtagctggaaat
tctgttccaacttccgttacaactgacgatgaaggatttgctcgagatggttctccgcaa
ggacaggacagttctcctcatccagctggtatagttttgaatcgtaatggctactacaca
atacctgcgatgtcggaattggggtcccttgttgatggggacggtaattgcttcatagaa
gggtttacaattggtagaaacggatacggtaacatttatttccctggtgtaatgaatatt
gttggtttgaattttgatgaaattgtttttattcgccacaaagaagtcacagtttatcca
gatgatgaaaaaaaaccagcattgggtgatgggttgaacagaaaagcccaagttaccttg
gataaggtatggccgatagataaggctaaacgccaacccatctctgatccaaatcgatta
cttgctatgaattatgaagatagattagaaaaagcatccatcaaattagatgcaaggttt
gttgaatataggcctgaaactggatcatgggttttcaaagttgatcatttttccaagtat
ggtcttgatgactctgatgaagaagacaatgcccctcctttgatagtaaaaacttcaatt
gatcccaataaaaaacttaaaacccttcaattagaactaagagatcaaggctcaaattta
aatacaaatggaaataataaaatggttgctaatttaaatgaagctaatctaattcgtaat
aacgagctttcgattgatgaggagattatgaagcgacacacctcaacttccattctcgaa
gatggactgaacatttcaaaaaataatggagtatccccaaatcataaagatggactagtg
tcccctatgagtcaacaattagttactattaatgcccaaaatgataaggttcagatgatg
aaggcatcactatttgatgaagatgatgaagaggacattgatactgaaatgatgcctctg
gagacggctaatgaatctctccaacctaagtctcggcctattattttggaacaaagaacc
cccagtgaggttgctcctccattatcacattcaatgatagctcgaggactgggtgggtct
ttttctatggatcaaagtggacataatctttcgtcgtctctccttcgcaaccaaattttg
tctcaattggcctcaaaaaaggaagtcattccaacaaaatcatcatctactaataataag
aatgcctcattaaattatagtttgacaaaaggctacgataactttgttactctcccttct
tctgggtctagtgatcgatgtaaaactattgttcctaaattttataacaaagtgccgttg
agtgattctcttctgttagagaaatattttattgctgatacgggttcattcatgaatcga
tccttcagatgtggatggggaccggaatggaagattgttaattgtggttcatctctagat
agtattcaagcttctctggattccgtgcatgctccttttgacgttactgttgaaaggttt
ggcaatttgtttaaaagaaatgaggaagtgattaaatgcttggagtcatggctaagtact
tctcttgagaattctgagatattctatggtgaaaatggaatcccgttctttacttccgta
gacggtgttgatacactcaattcttacgttaaagaagcaaatgcccagtttgatagttat
gattctgcatcatctgaatttgcgaaggagcttaaacaagccaaagaagtttggagtctc
tgtgaagctctttggggagatttagatgaaaatatgaatgaattagactcggattctcac
aaaattacaatgcaaagacgtcaagcactctcccgttggctggagcttgccatttcaagt
gaaaagaaagatcttctcgaggataagatggatacatgtactaaggatacgagttctatg
gggaggattttaaacctgttaacagcaaataaaataatagaagcttgtgatcaatgtcat
gaggatggaaatcatttctctgcgctacttatgtcccagtttggtggtggtgtggctggt
tcgcttgtatttaatcaaatggatagatggcaagaggctcatactgaccgttttattgag
aaagatatgttgcgattttttgctcttgtagctggaaatccctattggcctgctagcgat
ggcaaaactattaatacttgtgaagatcttgactggaaatgtgctttttcatatcatctt
tggtatctttgttctccggttgcatccatcagtgatgctctcactttatatattaatgct
tttgaaggccacactgagtttggtgtgtatgcaagtgccccttttcctcaatactctggg
gttgatgatggtagtgcatatgatatagcttaccatttacttcgtctctactgcgatagg
tctcattctttggagtccctcttatctccgattactcattccaaggatcctttggatttc
agactatcctggttcattaatcaagcactgatatctcttggttataaacacttgaacact
attcgacaagatgacctgactgctagttttgcatcacaactagagaatcttagtctttgg
gaatggtcggtctttgttctattgcatttgagtcacggacctaagagagaatctctgatc
aaggatgtcatttgtcgtggtattcggtcatgcaaggatttagattctaaggaagaattt
ttgaaggaaaaattaagtatacccacggaatggattgcagacggtaaagcaaattgggct
gcagctaattgtcagttcatggatcaatcctggtatcttctgaaagcaaaacggtggaat
ttggctcacgaagtcttaattaaaagaatagctccagatgccatcataaatgaggactat
gactttttatacaaggtgctcgatgaacttgcagagaatgatcccgacactcatgtgacg
ggttggggtctaagcggccaaatattttttgattttattaatgtggatagagacgtaaat
attctcaaggaaaagcgtgacgactcctccatcacatttttcattgagaaactcaagcct
aaagtcatcagtttatgctcaagaatatccaaacttagaacagaaactgcaaaagagaga
ctctgtcaatctgaaattgccaaacgaatggcttatttaatgagagcagttctcacagcg
gatttttcgaatggtggggaaacttcgaaggccatggcctctaggatccttgctgagact
ttaactcagctcccacttcctgacgattatgcccttcacgaactacgcaatcttacaaag
aattatatgcttgaaatcatggaacactga
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